Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.74■■□□□ 1.71
CISHQ9NSE2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CISHQ9NSE2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CISHQ9NSE2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CISHQ9NSE2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.73■■□□□ 1.71
CISHQ9NSE2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
CISHQ9NSE2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CISHQ9NSE2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.73■■□□□ 1.71
CISHQ9NSE2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CISHQ9NSE2 KRT18P60-201ENST00000312876 1297 ntBASIC25.72■■□□□ 1.71
CISHQ9NSE2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.72■■□□□ 1.71
CISHQ9NSE2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
CISHQ9NSE2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CISHQ9NSE2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.72■■□□□ 1.71
CISHQ9NSE2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CISHQ9NSE2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CISHQ9NSE2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
CISHQ9NSE2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CISHQ9NSE2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.7■■□□□ 1.7
CISHQ9NSE2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.7■■□□□ 1.7
CISHQ9NSE2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.7■■□□□ 1.7
CISHQ9NSE2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CISHQ9NSE2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CISHQ9NSE2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.7■■□□□ 1.7
CISHQ9NSE2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.69■■□□□ 1.7
CISHQ9NSE2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CISHQ9NSE2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CISHQ9NSE2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CISHQ9NSE2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CISHQ9NSE2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CISHQ9NSE2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.68■■□□□ 1.7
CISHQ9NSE2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
CISHQ9NSE2 SPCS2P3-201ENST00000500401 656 ntBASIC25.68■■□□□ 1.7
CISHQ9NSE2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CISHQ9NSE2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
CISHQ9NSE2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
CISHQ9NSE2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
CISHQ9NSE2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CISHQ9NSE2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CISHQ9NSE2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CISHQ9NSE2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CISHQ9NSE2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CISHQ9NSE2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CISHQ9NSE2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CISHQ9NSE2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CISHQ9NSE2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
CISHQ9NSE2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.65■■□□□ 1.7
CISHQ9NSE2 AC129492.7-201ENST00000622992 756 ntBASIC25.65■■□□□ 1.7
CISHQ9NSE2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CISHQ9NSE2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.65■■□□□ 1.7
CISHQ9NSE2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CISHQ9NSE2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CISHQ9NSE2 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CISHQ9NSE2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CISHQ9NSE2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CISHQ9NSE2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CISHQ9NSE2 DUX4L9-201ENST00000449051 1259 ntBASIC25.63■■□□□ 1.69
CISHQ9NSE2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CISHQ9NSE2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CISHQ9NSE2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CISHQ9NSE2 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CISHQ9NSE2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CISHQ9NSE2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CISHQ9NSE2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.61■■□□□ 1.69
CISHQ9NSE2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
CISHQ9NSE2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CISHQ9NSE2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
CISHQ9NSE2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CISHQ9NSE2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CISHQ9NSE2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CISHQ9NSE2 AC018755.3-202ENST00000596210 929 ntBASIC25.6■■□□□ 1.69
CISHQ9NSE2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
CISHQ9NSE2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CISHQ9NSE2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CISHQ9NSE2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
CISHQ9NSE2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CISHQ9NSE2 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CISHQ9NSE2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.59■■□□□ 1.69
CISHQ9NSE2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CISHQ9NSE2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.59■■□□□ 1.69
CISHQ9NSE2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CISHQ9NSE2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.58■■□□□ 1.69
CISHQ9NSE2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.58■■□□□ 1.69
CISHQ9NSE2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
CISHQ9NSE2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
CISHQ9NSE2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CISHQ9NSE2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CISHQ9NSE2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CISHQ9NSE2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CISHQ9NSE2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CISHQ9NSE2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CISHQ9NSE2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CISHQ9NSE2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.57■■□□□ 1.68
CISHQ9NSE2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms