Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.95■■□□□ 1.74
SIX2Q9NPC8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SIX2Q9NPC8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
SIX2Q9NPC8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.95■■□□□ 1.74
SIX2Q9NPC8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SIX2Q9NPC8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
SIX2Q9NPC8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SIX2Q9NPC8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SIX2Q9NPC8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SIX2Q9NPC8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.92■■□□□ 1.74
SIX2Q9NPC8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SIX2Q9NPC8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.9■■□□□ 1.74
SIX2Q9NPC8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SIX2Q9NPC8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SIX2Q9NPC8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
SIX2Q9NPC8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.89■■□□□ 1.74
SIX2Q9NPC8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SIX2Q9NPC8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SIX2Q9NPC8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SIX2Q9NPC8 GPX1-201ENST00000419349 1106 ntBASIC25.88■■□□□ 1.73
SIX2Q9NPC8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.88■■□□□ 1.73
SIX2Q9NPC8 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.88■■□□□ 1.73
SIX2Q9NPC8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.88■■□□□ 1.73
SIX2Q9NPC8 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 AC022211.4-201ENST00000625094 2161 ntBASIC25.87■■□□□ 1.73
SIX2Q9NPC8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.87■■□□□ 1.73
SIX2Q9NPC8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SIX2Q9NPC8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SIX2Q9NPC8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SIX2Q9NPC8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.86■■□□□ 1.73
SIX2Q9NPC8 RP9P-202ENST00000450133 1212 ntBASIC25.86■■□□□ 1.73
SIX2Q9NPC8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SIX2Q9NPC8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SIX2Q9NPC8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SIX2Q9NPC8 AC142381.3-201ENST00000568208 1670 ntBASIC25.85■■□□□ 1.73
SIX2Q9NPC8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.85■■□□□ 1.73
SIX2Q9NPC8 AC093536.1-201ENST00000569153 554 ntBASIC25.85■■□□□ 1.73
SIX2Q9NPC8 AC007029.1-201ENST00000604183 313 ntBASIC25.85■■□□□ 1.73
SIX2Q9NPC8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.85■■□□□ 1.73
SIX2Q9NPC8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
SIX2Q9NPC8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SIX2Q9NPC8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SIX2Q9NPC8 AC097639.1-201ENST00000565519 1891 ntBASIC25.84■■□□□ 1.73
SIX2Q9NPC8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SIX2Q9NPC8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.83■■□□□ 1.73
SIX2Q9NPC8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SIX2Q9NPC8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.72
SIX2Q9NPC8 AC138932.3-201ENST00000567634 1902 ntBASIC25.82■■□□□ 1.72
SIX2Q9NPC8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SIX2Q9NPC8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SIX2Q9NPC8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SIX2Q9NPC8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.81■■□□□ 1.72
SIX2Q9NPC8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.81■■□□□ 1.72
SIX2Q9NPC8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.81■■□□□ 1.72
SIX2Q9NPC8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.8■■□□□ 1.72
SIX2Q9NPC8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SIX2Q9NPC8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.8■■□□□ 1.72
SIX2Q9NPC8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.8■■□□□ 1.72
SIX2Q9NPC8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SIX2Q9NPC8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SIX2Q9NPC8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 RAP2CP1-202ENST00000605179 643 ntBASIC25.79■■□□□ 1.72
SIX2Q9NPC8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SIX2Q9NPC8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms