Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SLC6A20Q9NP91 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC6A20Q9NP91 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.17■■□□□ 1.3
SLC6A20Q9NP91 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SLC6A20Q9NP91 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A20Q9NP91 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A20Q9NP91 AC004987.1-201ENST00000428627 508 ntBASIC23.16■■□□□ 1.3
SLC6A20Q9NP91 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC6A20Q9NP91 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.16■■□□□ 1.3
SLC6A20Q9NP91 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 TSPY13P-201ENST00000338964 914 ntBASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC6A20Q9NP91 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SLC6A20Q9NP91 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC6A20Q9NP91 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.14■■□□□ 1.3
SLC6A20Q9NP91 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 ATP5G2P3-201ENST00000429083 425 ntBASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC6A20Q9NP91 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A20Q9NP91 AC010501.1-201ENST00000606270 1962 ntBASIC23.13■■□□□ 1.29
SLC6A20Q9NP91 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC6A20Q9NP91 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC6A20Q9NP91 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC6A20Q9NP91 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.13■■□□□ 1.29
SLC6A20Q9NP91 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SLC6A20Q9NP91 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 AC096887.2-201ENST00000623443 1957 ntBASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 DUX4L18-201ENST00000553347 1267 ntBASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 AC018755.3-202ENST00000596210 929 ntBASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 MIR6765-201ENST00000614092 87 ntBASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SLC6A20Q9NP91 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A20Q9NP91 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SLC6A20Q9NP91 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A20Q9NP91 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.1■■□□□ 1.29
SLC6A20Q9NP91 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A20Q9NP91 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SLC6A20Q9NP91 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 DUSP8P4-201ENST00000399538 1761 ntBASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 AC145676.1-201ENST00000514988 2004 ntBASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.09■■□□□ 1.29
SLC6A20Q9NP91 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A20Q9NP91 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A20Q9NP91 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SLC6A20Q9NP91 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
SLC6A20Q9NP91 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.07■■□□□ 1.28
SLC6A20Q9NP91 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A20Q9NP91 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC6A20Q9NP91 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.07■■□□□ 1.28
SLC6A20Q9NP91 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SLC6A20Q9NP91 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.06■■□□□ 1.28
SLC6A20Q9NP91 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SLC6A20Q9NP91 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SLC6A20Q9NP91 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A20Q9NP91 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.04■■□□□ 1.28
SLC6A20Q9NP91 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A20Q9NP91 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SLC6A20Q9NP91 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
SLC6A20Q9NP91 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
SLC6A20Q9NP91 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A20Q9NP91 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A20Q9NP91 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SLC6A20Q9NP91 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms