Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
PCDH18Q9HCL0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
PCDH18Q9HCL0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.95■■□□□ 1.58
PCDH18Q9HCL0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.95■■□□□ 1.58
PCDH18Q9HCL0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH18Q9HCL0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.94■■□□□ 1.58
PCDH18Q9HCL0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH18Q9HCL0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
PCDH18Q9HCL0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH18Q9HCL0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDH18Q9HCL0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.93■■□□□ 1.58
PCDH18Q9HCL0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDH18Q9HCL0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDH18Q9HCL0 RNF126P1-201ENST00000567452 1320 ntBASIC24.92■■□□□ 1.58
PCDH18Q9HCL0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.92■■□□□ 1.58
PCDH18Q9HCL0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDH18Q9HCL0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
PCDH18Q9HCL0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDH18Q9HCL0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDH18Q9HCL0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PCDH18Q9HCL0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.91■■□□□ 1.58
PCDH18Q9HCL0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PCDH18Q9HCL0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDH18Q9HCL0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.89■■□□□ 1.58
PCDH18Q9HCL0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH18Q9HCL0 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.89■■□□□ 1.58
PCDH18Q9HCL0 RAP2CP1-202ENST00000605179 643 ntBASIC24.89■■□□□ 1.58
PCDH18Q9HCL0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDH18Q9HCL0 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDH18Q9HCL0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.57
PCDH18Q9HCL0 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
PCDH18Q9HCL0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH18Q9HCL0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH18Q9HCL0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
PCDH18Q9HCL0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH18Q9HCL0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
PCDH18Q9HCL0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDH18Q9HCL0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH18Q9HCL0 AC026202.3-201ENST00000600805 1127 ntBASIC24.87■■□□□ 1.57
PCDH18Q9HCL0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDH18Q9HCL0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.87■■□□□ 1.57
PCDH18Q9HCL0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
PCDH18Q9HCL0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.87■■□□□ 1.57
PCDH18Q9HCL0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
PCDH18Q9HCL0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH18Q9HCL0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH18Q9HCL0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PCDH18Q9HCL0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH18Q9HCL0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH18Q9HCL0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PCDH18Q9HCL0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH18Q9HCL0 HSD17B1P1-201ENST00000590052 955 ntBASIC24.84■■□□□ 1.57
PCDH18Q9HCL0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDH18Q9HCL0 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.84■■□□□ 1.57
PCDH18Q9HCL0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
PCDH18Q9HCL0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.83■■□□□ 1.56
PCDH18Q9HCL0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH18Q9HCL0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH18Q9HCL0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH18Q9HCL0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH18Q9HCL0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH18Q9HCL0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDH18Q9HCL0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDH18Q9HCL0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDH18Q9HCL0 AC009831.1-201ENST00000580420 1582 ntBASIC24.81■■□□□ 1.56
PCDH18Q9HCL0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDH18Q9HCL0 AC097639.1-201ENST00000565519 1891 ntBASIC24.81■■□□□ 1.56
PCDH18Q9HCL0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.8■■□□□ 1.56
PCDH18Q9HCL0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH18Q9HCL0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH18Q9HCL0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH18Q9HCL0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDH18Q9HCL0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDH18Q9HCL0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
PCDH18Q9HCL0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDH18Q9HCL0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH18Q9HCL0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDH18Q9HCL0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDH18Q9HCL0 RARRES2P2-201ENST00000394842 485 ntBASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms