Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CHD8Q9HCK8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD8Q9HCK8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.06■■□□□ 1.28
CHD8Q9HCK8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CHD8Q9HCK8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CHD8Q9HCK8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CHD8Q9HCK8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CHD8Q9HCK8 EDA-201ENST00000338901 1233 ntBASIC23.04■■□□□ 1.28
CHD8Q9HCK8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.04■■□□□ 1.28
CHD8Q9HCK8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD8Q9HCK8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD8Q9HCK8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CHD8Q9HCK8 MIR4281-201ENST00000580852 62 ntBASIC23.03■■□□□ 1.28
CHD8Q9HCK8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD8Q9HCK8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CHD8Q9HCK8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD8Q9HCK8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CHD8Q9HCK8 AL355001.2-201ENST00000620617 1191 ntBASIC23.03■■□□□ 1.28
CHD8Q9HCK8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.03■■□□□ 1.28
CHD8Q9HCK8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CHD8Q9HCK8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHD8Q9HCK8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CHD8Q9HCK8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CHD8Q9HCK8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.01■■□□□ 1.27
CHD8Q9HCK8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.01■■□□□ 1.27
CHD8Q9HCK8 ID1-201ENST00000376105 1233 ntBASIC23.01■■□□□ 1.27
CHD8Q9HCK8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
CHD8Q9HCK8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.01■■□□□ 1.27
CHD8Q9HCK8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23■■□□□ 1.27
CHD8Q9HCK8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHD8Q9HCK8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHD8Q9HCK8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.99■■□□□ 1.27
CHD8Q9HCK8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CHD8Q9HCK8 AC120024.1-201ENST00000562672 995 ntBASIC22.98■■□□□ 1.27
CHD8Q9HCK8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.98■■□□□ 1.27
CHD8Q9HCK8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.98■■□□□ 1.27
CHD8Q9HCK8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.98■■□□□ 1.27
CHD8Q9HCK8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 AC024257.2-201ENST00000549699 147 ntBASIC22.97■■□□□ 1.27
CHD8Q9HCK8 AF213884.3-201ENST00000563833 479 ntBASIC22.97■■□□□ 1.27
CHD8Q9HCK8 MTDHP2-201ENST00000601468 714 ntBASIC22.97■■□□□ 1.27
CHD8Q9HCK8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CHD8Q9HCK8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CHD8Q9HCK8 AC100797.4-201ENST00000631653 1827 ntBASIC22.96■■□□□ 1.27
CHD8Q9HCK8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.96■■□□□ 1.27
CHD8Q9HCK8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD8Q9HCK8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.95■■□□□ 1.26
CHD8Q9HCK8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CHD8Q9HCK8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.95■■□□□ 1.26
CHD8Q9HCK8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.95■■□□□ 1.26
CHD8Q9HCK8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD8Q9HCK8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CHD8Q9HCK8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
CHD8Q9HCK8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CHD8Q9HCK8 MIR939-201ENST00000401314 82 ntBASIC22.93■■□□□ 1.26
CHD8Q9HCK8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
CHD8Q9HCK8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.93■■□□□ 1.26
CHD8Q9HCK8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CHD8Q9HCK8 UNC93B3-201ENST00000308076 687 ntBASIC22.92■■□□□ 1.26
CHD8Q9HCK8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.92■■□□□ 1.26
CHD8Q9HCK8 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
CHD8Q9HCK8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHD8Q9HCK8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 IKBKGP1-201ENST00000612193 1073 ntBASIC22.91■■□□□ 1.26
CHD8Q9HCK8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHD8Q9HCK8 AL359504.2-201ENST00000605506 1601 ntBASIC22.9■■□□□ 1.26
CHD8Q9HCK8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.9■■□□□ 1.26
CHD8Q9HCK8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.9■■□□□ 1.26
CHD8Q9HCK8 AL135925.1-201ENST00000605920 1701 ntBASIC22.9■■□□□ 1.26
CHD8Q9HCK8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.89■■□□□ 1.25
CHD8Q9HCK8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.89■■□□□ 1.25
CHD8Q9HCK8 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.89■■□□□ 1.25
CHD8Q9HCK8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.89■■□□□ 1.25
CHD8Q9HCK8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.89■■□□□ 1.25
CHD8Q9HCK8 AL136967.2-201ENST00000623968 743 ntBASIC22.89■■□□□ 1.25
CHD8Q9HCK8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.88■■□□□ 1.25
CHD8Q9HCK8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHD8Q9HCK8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHD8Q9HCK8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms