Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHRDQ9H2X0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.48■■□□□ 1.51
CHRDQ9H2X0 AC120024.1-201ENST00000562672 995 ntBASIC24.48■■□□□ 1.51
CHRDQ9H2X0 AC131281.2-201ENST00000520478 145 ntBASIC24.47■■□□□ 1.51
CHRDQ9H2X0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.47■■□□□ 1.51
CHRDQ9H2X0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.47■■□□□ 1.51
CHRDQ9H2X0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHRDQ9H2X0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CHRDQ9H2X0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
CHRDQ9H2X0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHRDQ9H2X0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.46■■□□□ 1.51
CHRDQ9H2X0 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.46■■□□□ 1.51
CHRDQ9H2X0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHRDQ9H2X0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 AC092028.1-203ENST00000608262 953 ntBASIC24.45■■□□□ 1.5
CHRDQ9H2X0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CHRDQ9H2X0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
CHRDQ9H2X0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHRDQ9H2X0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.44■■□□□ 1.5
CHRDQ9H2X0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.44■■□□□ 1.5
CHRDQ9H2X0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHRDQ9H2X0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CHRDQ9H2X0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRDQ9H2X0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRDQ9H2X0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRDQ9H2X0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.43■■□□□ 1.5
CHRDQ9H2X0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.43■■□□□ 1.5
CHRDQ9H2X0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHRDQ9H2X0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.42■■□□□ 1.5
CHRDQ9H2X0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHRDQ9H2X0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
CHRDQ9H2X0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHRDQ9H2X0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
CHRDQ9H2X0 AL136116.3-201ENST00000402907 1138 ntBASIC24.39■■□□□ 1.49
CHRDQ9H2X0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
CHRDQ9H2X0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.38■■□□□ 1.49
CHRDQ9H2X0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CHRDQ9H2X0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHRDQ9H2X0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHRDQ9H2X0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHRDQ9H2X0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 ABCB10P1-201ENST00000614297 2181 ntBASIC24.36■■□□□ 1.49
CHRDQ9H2X0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.36■■□□□ 1.49
CHRDQ9H2X0 AL117332.1-201ENST00000622628 974 ntBASIC24.36■■□□□ 1.49
CHRDQ9H2X0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDQ9H2X0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDQ9H2X0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
CHRDQ9H2X0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHRDQ9H2X0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.35■■□□□ 1.49
CHRDQ9H2X0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CHRDQ9H2X0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
CHRDQ9H2X0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.34■■□□□ 1.49
CHRDQ9H2X0 MIR3621-201ENST00000580529 85 ntBASIC24.34■■□□□ 1.49
CHRDQ9H2X0 MIR4281-201ENST00000580852 62 ntBASIC24.34■■□□□ 1.49
CHRDQ9H2X0 AC110285.6-201ENST00000617652 491 ntBASIC24.34■■□□□ 1.49
CHRDQ9H2X0 AL449106.1-201ENST00000608517 1980 ntBASIC24.34■■□□□ 1.49
CHRDQ9H2X0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHRDQ9H2X0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.34■■□□□ 1.49
CHRDQ9H2X0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.33■■□□□ 1.49
CHRDQ9H2X0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHRDQ9H2X0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
CHRDQ9H2X0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
CHRDQ9H2X0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 AC010997.5-201ENST00000609182 354 ntBASIC24.32■■□□□ 1.48
CHRDQ9H2X0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHRDQ9H2X0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.31■■□□□ 1.48
CHRDQ9H2X0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDQ9H2X0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRDQ9H2X0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms