Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssbp2Q9CYZ8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp2Q9CYZ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp2Q9CYZ8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssbp2Q9CYZ8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssbp2Q9CYZ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ssbp2Q9CYZ8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp2Q9CYZ8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Ssbp2Q9CYZ8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp2Q9CYZ8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ssbp2Q9CYZ8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp2Q9CYZ8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssbp2Q9CYZ8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.38■□□□□ 0.37
Ssbp2Q9CYZ8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ssbp2Q9CYZ8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.38■□□□□ 0.37
Ssbp2Q9CYZ8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ssbp2Q9CYZ8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp2Q9CYZ8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ssbp2Q9CYZ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp2Q9CYZ8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp2Q9CYZ8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp2Q9CYZ8 Gm27502-201ENSMUST00000183495 199 ntBASIC17.37■□□□□ 0.37
Ssbp2Q9CYZ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp2Q9CYZ8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssbp2Q9CYZ8 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssbp2Q9CYZ8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssbp2Q9CYZ8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp2Q9CYZ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp2Q9CYZ8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp2Q9CYZ8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssbp2Q9CYZ8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ssbp2Q9CYZ8 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.33■□□□□ 0.37
Ssbp2Q9CYZ8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssbp2Q9CYZ8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssbp2Q9CYZ8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.33■□□□□ 0.37
Ssbp2Q9CYZ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.33■□□□□ 0.36
Ssbp2Q9CYZ8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ssbp2Q9CYZ8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ssbp2Q9CYZ8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.33■□□□□ 0.36
Ssbp2Q9CYZ8 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.33■□□□□ 0.36
Ssbp2Q9CYZ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp2Q9CYZ8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp2Q9CYZ8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp2Q9CYZ8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.32■□□□□ 0.36
Ssbp2Q9CYZ8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp2Q9CYZ8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssbp2Q9CYZ8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Mir6538-201ENSMUST00000183713 110 ntBASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssbp2Q9CYZ8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssbp2Q9CYZ8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssbp2Q9CYZ8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssbp2Q9CYZ8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.29■□□□□ 0.36
Ssbp2Q9CYZ8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ssbp2Q9CYZ8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssbp2Q9CYZ8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssbp2Q9CYZ8 Gm14523-201ENSMUST00000117260 558 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 154.7 ms