Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61bQ9CQS8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Gm9959-201ENSMUST00000068277 390 ntBASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61bQ9CQS8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61bQ9CQS8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sec61bQ9CQS8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC11.64□□□□□ -0.55
Sec61bQ9CQS8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61bQ9CQS8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Sec61bQ9CQS8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Gm7417-201ENSMUST00000192950 473 ntBASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sec61bQ9CQS8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sec61bQ9CQS8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sec61bQ9CQS8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sec61bQ9CQS8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61bQ9CQS8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms