Protein–RNA interactions for Protein: Q9CQD4

Chmp1b2, Charged multivesicular body protein 1b-2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b2Q9CQD4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp1b2Q9CQD4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Chmp1b2Q9CQD4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chmp1b2Q9CQD4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp1b2Q9CQD4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp1b2Q9CQD4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Chmp1b2Q9CQD4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp1b2Q9CQD4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp1b2Q9CQD4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp1b2Q9CQD4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp1b2Q9CQD4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp1b2Q9CQD4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp1b2Q9CQD4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Gm10420-201ENSMUST00000121713 882 ntBASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp1b2Q9CQD4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Chmp1b2Q9CQD4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chmp1b2Q9CQD4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp1b2Q9CQD4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chmp1b2Q9CQD4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.79■□□□□ 0.76
Chmp1b2Q9CQD4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Chmp1b2Q9CQD4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chmp1b2Q9CQD4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp1b2Q9CQD4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp1b2Q9CQD4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp1b2Q9CQD4 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.78■□□□□ 0.76
Chmp1b2Q9CQD4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1b2Q9CQD4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1b2Q9CQD4 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1b2Q9CQD4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.77■□□□□ 0.76
Chmp1b2Q9CQD4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1b2Q9CQD4 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1b2Q9CQD4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp1b2Q9CQD4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1b2Q9CQD4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chmp1b2Q9CQD4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1b2Q9CQD4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1b2Q9CQD4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1b2Q9CQD4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1b2Q9CQD4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.75■□□□□ 0.75
Chmp1b2Q9CQD4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.75■□□□□ 0.75
Chmp1b2Q9CQD4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1b2Q9CQD4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp1b2Q9CQD4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chmp1b2Q9CQD4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms