Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRIM2Q9C040 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
TRIM2Q9C040 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TRIM2Q9C040 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TRIM2Q9C040 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 GPX1-201ENST00000419349 1106 ntBASIC22.01■■□□□ 1.11
TRIM2Q9C040 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 MIR3960-201ENST00000583311 91 ntBASIC22.01■■□□□ 1.11
TRIM2Q9C040 AC092296.2-201ENST00000589470 999 ntBASIC22.01■■□□□ 1.11
TRIM2Q9C040 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
TRIM2Q9C040 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
TRIM2Q9C040 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22■■□□□ 1.11
TRIM2Q9C040 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22■■□□□ 1.11
TRIM2Q9C040 SMPD5-203ENST00000639008 1464 ntBASIC22■■□□□ 1.11
TRIM2Q9C040 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22■■□□□ 1.11
TRIM2Q9C040 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22■■□□□ 1.11
TRIM2Q9C040 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 AC022413.1-201ENST00000624602 984 ntBASIC21.99■■□□□ 1.11
TRIM2Q9C040 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TRIM2Q9C040 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.99■■□□□ 1.11
TRIM2Q9C040 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM2Q9C040 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.98■■□□□ 1.11
TRIM2Q9C040 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TRIM2Q9C040 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM2Q9C040 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.97■■□□□ 1.11
TRIM2Q9C040 RARRES2P2-201ENST00000394842 485 ntBASIC21.97■■□□□ 1.11
TRIM2Q9C040 ECEL1P2-201ENST00000461596 1295 ntBASIC21.97■■□□□ 1.11
TRIM2Q9C040 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM2Q9C040 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TRIM2Q9C040 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM2Q9C040 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.96■■□□□ 1.11
TRIM2Q9C040 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.96■■□□□ 1.11
TRIM2Q9C040 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM2Q9C040 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRIM2Q9C040 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRIM2Q9C040 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM2Q9C040 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM2Q9C040 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRIM2Q9C040 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TRIM2Q9C040 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM2Q9C040 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM2Q9C040 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.94■■□□□ 1.1
TRIM2Q9C040 RNF126P1-201ENST00000567452 1320 ntBASIC21.94■■□□□ 1.1
TRIM2Q9C040 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TRIM2Q9C040 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRIM2Q9C040 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM2Q9C040 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRIM2Q9C040 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.93■■□□□ 1.1
TRIM2Q9C040 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
TRIM2Q9C040 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRIM2Q9C040 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRIM2Q9C040 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.91■■□□□ 1.1
TRIM2Q9C040 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms