Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.73■□□□□ 0.75
Ubqln4Q99NB8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.73■□□□□ 0.75
Ubqln4Q99NB8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.73■□□□□ 0.75
Ubqln4Q99NB8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubqln4Q99NB8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubqln4Q99NB8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubqln4Q99NB8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Gm7332-201ENSMUST00000118351 454 ntBASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubqln4Q99NB8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubqln4Q99NB8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubqln4Q99NB8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubqln4Q99NB8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ubqln4Q99NB8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubqln4Q99NB8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ubqln4Q99NB8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Gm12366-201ENSMUST00000121722 873 ntBASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Gm5786-201ENSMUST00000085368 882 ntBASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubqln4Q99NB8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubqln4Q99NB8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ubqln4Q99NB8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln4Q99NB8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln4Q99NB8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln4Q99NB8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln4Q99NB8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln4Q99NB8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ubqln4Q99NB8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ubqln4Q99NB8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubqln4Q99NB8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.64■□□□□ 0.73
Ubqln4Q99NB8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.64■□□□□ 0.73
Ubqln4Q99NB8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.64■□□□□ 0.73
Ubqln4Q99NB8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubqln4Q99NB8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ubqln4Q99NB8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln4Q99NB8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln4Q99NB8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln4Q99NB8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln4Q99NB8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln4Q99NB8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubqln4Q99NB8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ubqln4Q99NB8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln4Q99NB8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubqln4Q99NB8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubqln4Q99NB8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms