Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Nkd1Q99MH6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd1Q99MH6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nkd1Q99MH6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Nkd1Q99MH6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd1Q99MH6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Nkd1Q99MH6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nkd1Q99MH6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.43■□□□□ 0.86
Nkd1Q99MH6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.42■□□□□ 0.86
Nkd1Q99MH6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd1Q99MH6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd1Q99MH6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd1Q99MH6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd1Q99MH6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd1Q99MH6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nkd1Q99MH6 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.4■□□□□ 0.86
Nkd1Q99MH6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkd1Q99MH6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkd1Q99MH6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkd1Q99MH6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nkd1Q99MH6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd1Q99MH6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd1Q99MH6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd1Q99MH6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.39■□□□□ 0.85
Nkd1Q99MH6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkd1Q99MH6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nkd1Q99MH6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nkd1Q99MH6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkd1Q99MH6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkd1Q99MH6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nkd1Q99MH6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.36■□□□□ 0.85
Nkd1Q99MH6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nkd1Q99MH6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nkd1Q99MH6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.35■□□□□ 0.85
Nkd1Q99MH6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nkd1Q99MH6 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.35■□□□□ 0.85
Nkd1Q99MH6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkd1Q99MH6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Nkd1Q99MH6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.34■□□□□ 0.85
Nkd1Q99MH6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.33■□□□□ 0.85
Nkd1Q99MH6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Nkd1Q99MH6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nkd1Q99MH6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.33■□□□□ 0.85
Nkd1Q99MH6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.33■□□□□ 0.85
Nkd1Q99MH6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd1Q99MH6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd1Q99MH6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd1Q99MH6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd1Q99MH6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd1Q99MH6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nkd1Q99MH6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Gm6311-201ENSMUST00000073790 878 ntBASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nkd1Q99MH6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd1Q99MH6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd1Q99MH6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nkd1Q99MH6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms