Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXB1Q99853 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.16■□□□□ 0.98
FOXB1Q99853 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXB1Q99853 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXB1Q99853 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
FOXB1Q99853 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXB1Q99853 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.16■□□□□ 0.98
FOXB1Q99853 AL592293.1-201ENST00000502889 1188 ntBASIC21.16■□□□□ 0.98
FOXB1Q99853 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXB1Q99853 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
FOXB1Q99853 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXB1Q99853 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXB1Q99853 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXB1Q99853 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXB1Q99853 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.15■□□□□ 0.98
FOXB1Q99853 AC096887.2-201ENST00000623443 1957 ntBASIC21.15■□□□□ 0.98
FOXB1Q99853 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXB1Q99853 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXB1Q99853 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
FOXB1Q99853 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXB1Q99853 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXB1Q99853 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.14■□□□□ 0.97
FOXB1Q99853 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.14■□□□□ 0.97
FOXB1Q99853 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXB1Q99853 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
FOXB1Q99853 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXB1Q99853 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
FOXB1Q99853 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXB1Q99853 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.13■□□□□ 0.97
FOXB1Q99853 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXB1Q99853 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXB1Q99853 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
FOXB1Q99853 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXB1Q99853 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
FOXB1Q99853 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
FOXB1Q99853 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
FOXB1Q99853 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXB1Q99853 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXB1Q99853 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXB1Q99853 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXB1Q99853 NTF6A-201ENST00000591175 560 ntBASIC21.11■□□□□ 0.97
FOXB1Q99853 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXB1Q99853 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXB1Q99853 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXB1Q99853 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXB1Q99853 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
FOXB1Q99853 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXB1Q99853 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXB1Q99853 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.1■□□□□ 0.97
FOXB1Q99853 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXB1Q99853 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXB1Q99853 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
FOXB1Q99853 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXB1Q99853 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXB1Q99853 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXB1Q99853 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
FOXB1Q99853 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXB1Q99853 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXB1Q99853 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXB1Q99853 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXB1Q99853 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXB1Q99853 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
FOXB1Q99853 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXB1Q99853 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.07■□□□□ 0.96
FOXB1Q99853 KRT18P60-201ENST00000312876 1297 ntBASIC21.07■□□□□ 0.96
FOXB1Q99853 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXB1Q99853 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
FOXB1Q99853 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXB1Q99853 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXB1Q99853 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
FOXB1Q99853 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXB1Q99853 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXB1Q99853 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FOXB1Q99853 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXB1Q99853 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
FOXB1Q99853 KRT18P10-201ENST00000388836 1287 ntBASIC21.05■□□□□ 0.96
FOXB1Q99853 SPCS2P3-201ENST00000500401 656 ntBASIC21.05■□□□□ 0.96
FOXB1Q99853 AC018755.3-202ENST00000596210 929 ntBASIC21.05■□□□□ 0.96
FOXB1Q99853 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
FOXB1Q99853 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.05■□□□□ 0.96
FOXB1Q99853 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXB1Q99853 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXB1Q99853 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXB1Q99853 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.04■□□□□ 0.96
FOXB1Q99853 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
FOXB1Q99853 AC129492.7-201ENST00000622992 756 ntBASIC21.04■□□□□ 0.96
FOXB1Q99853 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FOXB1Q99853 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXB1Q99853 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXB1Q99853 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXB1Q99853 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXB1Q99853 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms