Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 AC022616.5-201ENST00000518796 181 ntBASIC35.13■■■■□ 3.21
SCAF11Q99590 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC35.13■■■■□ 3.21
SCAF11Q99590 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC35.12■■■■□ 3.21
SCAF11Q99590 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC35.12■■■■□ 3.21
SCAF11Q99590 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC35.12■■■■□ 3.21
SCAF11Q99590 NALT1-201ENST00000429224 738 ntTSL 5 BASIC35.12■■■■□ 3.21
SCAF11Q99590 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
SCAF11Q99590 TRIR-202ENST00000588213 841 ntTSL 3 BASIC35.11■■■■□ 3.21
SCAF11Q99590 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC35.11■■■■□ 3.21
SCAF11Q99590 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SCAF11Q99590 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
SCAF11Q99590 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
SCAF11Q99590 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
SCAF11Q99590 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC35.1■■■■□ 3.21
SCAF11Q99590 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
SCAF11Q99590 WHAMMP3-201ENST00000611636 1609 ntBASIC35.09■■■■□ 3.21
SCAF11Q99590 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC35.08■■■■□ 3.21
SCAF11Q99590 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC35.08■■■■□ 3.21
SCAF11Q99590 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC35.08■■■■□ 3.21
SCAF11Q99590 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
SCAF11Q99590 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
SCAF11Q99590 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC35.07■■■■□ 3.2
SCAF11Q99590 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC35.07■■■■□ 3.2
SCAF11Q99590 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SCAF11Q99590 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
SCAF11Q99590 AC137630.3-201ENST00000607245 391 ntBASIC35.07■■■■□ 3.2
SCAF11Q99590 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
SCAF11Q99590 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC35.06■■■■□ 3.2
SCAF11Q99590 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC35.06■■■■□ 3.2
SCAF11Q99590 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC35.06■■■■□ 3.2
SCAF11Q99590 TSPY9P-201ENST00000440215 945 ntBASIC35.05■■■■□ 3.2
SCAF11Q99590 TSPY11P-201ENST00000442607 1045 ntBASIC35.05■■■■□ 3.2
SCAF11Q99590 AC021242.3-201ENST00000607598 1377 ntBASIC35.05■■■■□ 3.2
SCAF11Q99590 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
SCAF11Q99590 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC35.05■■■■□ 3.2
SCAF11Q99590 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC35.05■■■■□ 3.2
SCAF11Q99590 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
SCAF11Q99590 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
SCAF11Q99590 KRT18P24-201ENST00000344739 1156 ntBASIC35.04■■■■□ 3.2
SCAF11Q99590 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC35.04■■■■□ 3.2
SCAF11Q99590 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC35.04■■■■□ 3.2
SCAF11Q99590 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC35.04■■■■□ 3.2
SCAF11Q99590 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC35.04■■■■□ 3.2
SCAF11Q99590 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC35.04■■■■□ 3.2
SCAF11Q99590 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC35.03■■■■□ 3.2
SCAF11Q99590 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC35.03■■■■□ 3.2
SCAF11Q99590 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC35.03■■■■□ 3.2
SCAF11Q99590 AC110285.6-201ENST00000617652 491 ntBASIC35.03■■■■□ 3.2
SCAF11Q99590 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF11Q99590 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
SCAF11Q99590 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF11Q99590 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC35.02■■■■□ 3.2
SCAF11Q99590 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
SCAF11Q99590 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC35.01■■■■□ 3.19
SCAF11Q99590 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
SCAF11Q99590 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC35.01■■■■□ 3.19
SCAF11Q99590 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC35.01■■■■□ 3.19
SCAF11Q99590 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC35.01■■■■□ 3.19
SCAF11Q99590 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
SCAF11Q99590 RPP21-222ENST00000433076 577 ntTSL 2 BASIC35■■■■□ 3.19
SCAF11Q99590 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
SCAF11Q99590 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC34.99■■■■□ 3.19
SCAF11Q99590 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
SCAF11Q99590 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC34.99■■■■□ 3.19
SCAF11Q99590 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC34.99■■■■□ 3.19
SCAF11Q99590 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
SCAF11Q99590 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC34.97■■■■□ 3.19
SCAF11Q99590 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC34.97■■■■□ 3.19
SCAF11Q99590 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
SCAF11Q99590 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC34.97■■■■□ 3.19
SCAF11Q99590 AL136116.3-201ENST00000402907 1138 ntBASIC34.97■■■■□ 3.19
SCAF11Q99590 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC34.96■■■■□ 3.19
SCAF11Q99590 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC34.96■■■■□ 3.19
SCAF11Q99590 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
SCAF11Q99590 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
SCAF11Q99590 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC34.95■■■■□ 3.19
SCAF11Q99590 SRR-208ENST00000576848 588 ntTSL 4 BASIC34.95■■■■□ 3.19
SCAF11Q99590 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
SCAF11Q99590 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
SCAF11Q99590 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC34.94■■■■□ 3.18
SCAF11Q99590 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC34.94■■■■□ 3.18
SCAF11Q99590 LINC01003-201ENST00000564834 1764 ntBASIC34.94■■■■□ 3.18
SCAF11Q99590 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
SCAF11Q99590 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC34.93■■■■□ 3.18
SCAF11Q99590 AL117332.1-201ENST00000622628 974 ntBASIC34.93■■■■□ 3.18
SCAF11Q99590 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC34.93■■■■□ 3.18
SCAF11Q99590 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SCAF11Q99590 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC34.92■■■■□ 3.18
SCAF11Q99590 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF11Q99590 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF11Q99590 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF11Q99590 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC34.92■■■■□ 3.18
SCAF11Q99590 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC34.92■■■■□ 3.18
SCAF11Q99590 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
SCAF11Q99590 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC34.91■■■■□ 3.18
SCAF11Q99590 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
SCAF11Q99590 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC34.9■■■■□ 3.18
SCAF11Q99590 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
SCAF11Q99590 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
SCAF11Q99590 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms