Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HIST1H2AAQ96QV6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 ECEL1P2-201ENST00000461596 1295 ntBASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 AL157400.5-201ENST00000507624 621 ntBASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2AAQ96QV6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HIST1H2AAQ96QV6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 AC092296.2-201ENST00000589470 999 ntBASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST1H2AAQ96QV6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 AC025884.2-201ENST00000553429 711 ntBASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HIST1H2AAQ96QV6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.64■□□□□ 0.9
HIST1H2AAQ96QV6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HIST1H2AAQ96QV6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
HIST1H2AAQ96QV6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2AAQ96QV6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
HIST1H2AAQ96QV6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2AAQ96QV6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HIST1H2AAQ96QV6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HIST1H2AAQ96QV6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HIST1H2AAQ96QV6 GPX1-201ENST00000419349 1106 ntBASIC20.62■□□□□ 0.89
HIST1H2AAQ96QV6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.62■□□□□ 0.89
HIST1H2AAQ96QV6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.62■□□□□ 0.89
HIST1H2AAQ96QV6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2AAQ96QV6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2AAQ96QV6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST1H2AAQ96QV6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2AAQ96QV6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST1H2AAQ96QV6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST1H2AAQ96QV6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2AAQ96QV6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2AAQ96QV6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2AAQ96QV6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 RP9P-202ENST00000450133 1212 ntBASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HIST1H2AAQ96QV6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AAQ96QV6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AAQ96QV6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AAQ96QV6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HIST1H2AAQ96QV6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AAQ96QV6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AAQ96QV6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HIST1H2AAQ96QV6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HIST1H2AAQ96QV6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms