Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFT1Q96AA3 AC022211.4-201ENST00000625094 2161 ntBASIC21.07■□□□□ 0.96
RFT1Q96AA3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFT1Q96AA3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFT1Q96AA3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFT1Q96AA3 AC010501.1-201ENST00000606270 1962 ntBASIC21.06■□□□□ 0.96
RFT1Q96AA3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RFT1Q96AA3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.06■□□□□ 0.96
RFT1Q96AA3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFT1Q96AA3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFT1Q96AA3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RFT1Q96AA3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFT1Q96AA3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RFT1Q96AA3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L13-201ENST00000554103 1267 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L15-201ENST00000611059 1267 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L23-201ENST00000615195 1269 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L24-201ENST00000617576 1269 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L22-201ENST00000618238 1269 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L20-201ENST00000619712 1269 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L21-201ENST00000622058 1269 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L10-201ENST00000622460 1267 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 DUX4L25-201ENST00000624915 1269 ntBASIC21.05■□□□□ 0.96
RFT1Q96AA3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFT1Q96AA3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RFT1Q96AA3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFT1Q96AA3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.04■□□□□ 0.96
RFT1Q96AA3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RFT1Q96AA3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFT1Q96AA3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFT1Q96AA3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
RFT1Q96AA3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFT1Q96AA3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFT1Q96AA3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFT1Q96AA3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFT1Q96AA3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.03■□□□□ 0.96
RFT1Q96AA3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RFT1Q96AA3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFT1Q96AA3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFT1Q96AA3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.03■□□□□ 0.96
RFT1Q96AA3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.02■□□□□ 0.96
RFT1Q96AA3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFT1Q96AA3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.02■□□□□ 0.96
RFT1Q96AA3 DUX4L11-201ENST00000611504 1267 ntBASIC21.02■□□□□ 0.96
RFT1Q96AA3 DUX4L12-201ENST00000614593 1267 ntBASIC21.02■□□□□ 0.96
RFT1Q96AA3 DUX4L14-201ENST00000621227 1267 ntBASIC21.02■□□□□ 0.96
RFT1Q96AA3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFT1Q96AA3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFT1Q96AA3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFT1Q96AA3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFT1Q96AA3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RFT1Q96AA3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFT1Q96AA3 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RFT1Q96AA3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
RFT1Q96AA3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RFT1Q96AA3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.01■□□□□ 0.95
RFT1Q96AA3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFT1Q96AA3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFT1Q96AA3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFT1Q96AA3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFT1Q96AA3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.01■□□□□ 0.95
RFT1Q96AA3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFT1Q96AA3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFT1Q96AA3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21■□□□□ 0.95
RFT1Q96AA3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21■□□□□ 0.95
RFT1Q96AA3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21■□□□□ 0.95
RFT1Q96AA3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RFT1Q96AA3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RFT1Q96AA3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RFT1Q96AA3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.99■□□□□ 0.95
RFT1Q96AA3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
RFT1Q96AA3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFT1Q96AA3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFT1Q96AA3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.98■□□□□ 0.95
RFT1Q96AA3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFT1Q96AA3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFT1Q96AA3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RFT1Q96AA3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFT1Q96AA3 MIR219A2-201ENST00000608502 1504 ntBASIC20.98■□□□□ 0.95
RFT1Q96AA3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.97■□□□□ 0.95
RFT1Q96AA3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 AC068473.5-201ENST00000616428 2072 ntBASIC20.97■□□□□ 0.95
RFT1Q96AA3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFT1Q96AA3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFT1Q96AA3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms