Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
Abca8bQ8K440 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
Abca8bQ8K440 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC33.36■■■□□ 2.93
Abca8bQ8K440 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Abca8bQ8K440 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Abca8bQ8K440 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Abca8bQ8K440 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
Abca8bQ8K440 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Abca8bQ8K440 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Abca8bQ8K440 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC33.35■■■□□ 2.93
Abca8bQ8K440 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Abca8bQ8K440 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Abca8bQ8K440 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC33.34■■■□□ 2.93
Abca8bQ8K440 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
Abca8bQ8K440 Gm45417-201ENSMUST00000209533 758 ntBASIC33.34■■■□□ 2.93
Abca8bQ8K440 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Abca8bQ8K440 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC33.33■■■□□ 2.93
Abca8bQ8K440 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
Abca8bQ8K440 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Abca8bQ8K440 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Abca8bQ8K440 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC33.31■■■□□ 2.92
Abca8bQ8K440 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Gm10399-202ENSMUST00000202768 748 ntBASIC33.31■■■□□ 2.92
Abca8bQ8K440 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Abca8bQ8K440 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Abca8bQ8K440 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC33.3■■■□□ 2.92
Abca8bQ8K440 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Abca8bQ8K440 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Abca8bQ8K440 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Abca8bQ8K440 Gm12821-201ENSMUST00000120022 600 ntBASIC33.29■■■□□ 2.92
Abca8bQ8K440 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8bQ8K440 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8bQ8K440 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8bQ8K440 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8bQ8K440 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Abca8bQ8K440 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC33.28■■■□□ 2.92
Abca8bQ8K440 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
Abca8bQ8K440 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Abca8bQ8K440 Fezf2-202ENSMUST00000224023 1917 ntBASIC33.28■■■□□ 2.92
Abca8bQ8K440 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8bQ8K440 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8bQ8K440 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8bQ8K440 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8bQ8K440 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8bQ8K440 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Abca8bQ8K440 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC33.26■■■□□ 2.92
Abca8bQ8K440 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.91
Abca8bQ8K440 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Abca8bQ8K440 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Abca8bQ8K440 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
Abca8bQ8K440 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
Abca8bQ8K440 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Abca8bQ8K440 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Abca8bQ8K440 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Abca8bQ8K440 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Abca8bQ8K440 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
Abca8bQ8K440 Golgb1-201ENSMUST00000023534 498 ntBASIC33.22■■■□□ 2.91
Abca8bQ8K440 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC33.21■■■□□ 2.91
Abca8bQ8K440 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Abca8bQ8K440 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Abca8bQ8K440 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC33.2■■■□□ 2.91
Abca8bQ8K440 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Abca8bQ8K440 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.9
Abca8bQ8K440 Gm11847-201ENSMUST00000125165 1119 ntBASIC33.2■■■□□ 2.9
Abca8bQ8K440 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC33.2■■■□□ 2.9
Abca8bQ8K440 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Abca8bQ8K440 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Abca8bQ8K440 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Abca8bQ8K440 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Abca8bQ8K440 AC117245.4-201ENSMUST00000217388 1646 ntBASIC33.18■■■□□ 2.9
Abca8bQ8K440 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Abca8bQ8K440 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC33.18■■■□□ 2.9
Abca8bQ8K440 Slc35b2-207ENSMUST00000226086 850 ntBASIC33.18■■■□□ 2.9
Abca8bQ8K440 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC33.18■■■□□ 2.9
Abca8bQ8K440 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Abca8bQ8K440 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Abca8bQ8K440 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC33.16■■■□□ 2.9
Abca8bQ8K440 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC33.16■■■□□ 2.9
Abca8bQ8K440 AC153524.1-201ENSMUST00000220436 1935 ntBASIC33.13■■■□□ 2.89
Abca8bQ8K440 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC33.13■■■□□ 2.89
Abca8bQ8K440 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Abca8bQ8K440 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Abca8bQ8K440 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Abca8bQ8K440 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Abca8bQ8K440 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
Abca8bQ8K440 Gm8093-201ENSMUST00000128935 1892 ntBASIC33.12■■■□□ 2.89
Abca8bQ8K440 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Abca8bQ8K440 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC33.12■■■□□ 2.89
Abca8bQ8K440 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC33.12■■■□□ 2.89
Abca8bQ8K440 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
Abca8bQ8K440 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Abca8bQ8K440 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms