Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SMC5Q8IY18 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.93■■■□□ 2.38
SMC5Q8IY18 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SMC5Q8IY18 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.93■■■□□ 2.38
SMC5Q8IY18 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SMC5Q8IY18 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SMC5Q8IY18 AC142381.3-201ENST00000568208 1670 ntBASIC29.92■■■□□ 2.38
SMC5Q8IY18 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SMC5Q8IY18 AC022211.4-201ENST00000625094 2161 ntBASIC29.92■■■□□ 2.38
SMC5Q8IY18 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SMC5Q8IY18 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
SMC5Q8IY18 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.91■■■□□ 2.38
SMC5Q8IY18 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.91■■■□□ 2.38
SMC5Q8IY18 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SMC5Q8IY18 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.91■■■□□ 2.38
SMC5Q8IY18 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SMC5Q8IY18 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SMC5Q8IY18 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
SMC5Q8IY18 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SMC5Q8IY18 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SMC5Q8IY18 SMPD5-203ENST00000639008 1464 ntBASIC29.9■■■□□ 2.38
SMC5Q8IY18 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SMC5Q8IY18 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
SMC5Q8IY18 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC29.9■■■□□ 2.38
SMC5Q8IY18 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
SMC5Q8IY18 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
SMC5Q8IY18 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.89■■■□□ 2.38
SMC5Q8IY18 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
SMC5Q8IY18 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SMC5Q8IY18 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SMC5Q8IY18 MIR3960-201ENST00000583311 91 ntBASIC29.88■■■□□ 2.37
SMC5Q8IY18 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
SMC5Q8IY18 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SMC5Q8IY18 ECEL1P2-201ENST00000461596 1295 ntBASIC29.87■■■□□ 2.37
SMC5Q8IY18 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SMC5Q8IY18 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SMC5Q8IY18 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.86■■■□□ 2.37
SMC5Q8IY18 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SMC5Q8IY18 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SMC5Q8IY18 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC29.86■■■□□ 2.37
SMC5Q8IY18 AC138932.3-201ENST00000567634 1902 ntBASIC29.85■■■□□ 2.37
SMC5Q8IY18 MIR4449-201ENST00000578365 66 ntBASIC29.85■■■□□ 2.37
SMC5Q8IY18 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SMC5Q8IY18 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
SMC5Q8IY18 AC097639.1-201ENST00000565519 1891 ntBASIC29.85■■■□□ 2.37
SMC5Q8IY18 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SMC5Q8IY18 AC022413.1-201ENST00000624602 984 ntBASIC29.84■■■□□ 2.37
SMC5Q8IY18 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SMC5Q8IY18 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SMC5Q8IY18 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SMC5Q8IY18 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SMC5Q8IY18 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SMC5Q8IY18 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SMC5Q8IY18 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SMC5Q8IY18 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
SMC5Q8IY18 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.83■■■□□ 2.37
SMC5Q8IY18 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SMC5Q8IY18 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
SMC5Q8IY18 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SMC5Q8IY18 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.82■■■□□ 2.36
SMC5Q8IY18 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
SMC5Q8IY18 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SMC5Q8IY18 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.8■■■□□ 2.36
SMC5Q8IY18 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SMC5Q8IY18 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
SMC5Q8IY18 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMC5Q8IY18 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.79■■■□□ 2.36
SMC5Q8IY18 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMC5Q8IY18 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SMC5Q8IY18 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.78■■■□□ 2.36
SMC5Q8IY18 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SMC5Q8IY18 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SMC5Q8IY18 AC093323.1-202ENST00000635031 2045 ntBASIC29.78■■■□□ 2.36
SMC5Q8IY18 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMC5Q8IY18 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
SMC5Q8IY18 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.77■■■□□ 2.36
SMC5Q8IY18 SLC6A10P-202ENST00000431994 2058 ntBASIC29.77■■■□□ 2.36
SMC5Q8IY18 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
SMC5Q8IY18 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SMC5Q8IY18 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SMC5Q8IY18 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SMC5Q8IY18 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
SMC5Q8IY18 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.76■■■□□ 2.35
SMC5Q8IY18 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SMC5Q8IY18 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SMC5Q8IY18 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMC5Q8IY18 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC29.75■■■□□ 2.35
SMC5Q8IY18 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMC5Q8IY18 RP9P-202ENST00000450133 1212 ntBASIC29.75■■■□□ 2.35
SMC5Q8IY18 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.75■■■□□ 2.35
SMC5Q8IY18 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SMC5Q8IY18 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
SMC5Q8IY18 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMC5Q8IY18 PKM-204ENST00000449901 2526 ntTSL 2 BASIC29.74■■■□□ 2.35
SMC5Q8IY18 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMC5Q8IY18 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SMC5Q8IY18 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.74■■■□□ 2.35
SMC5Q8IY18 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SMC5Q8IY18 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
SMC5Q8IY18 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms