Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RFX6Q8HWS3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFX6Q8HWS3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
RFX6Q8HWS3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFX6Q8HWS3 MIR3960-201ENST00000583311 91 ntBASIC24.93■■□□□ 1.58
RFX6Q8HWS3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFX6Q8HWS3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
RFX6Q8HWS3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
RFX6Q8HWS3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RFX6Q8HWS3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RFX6Q8HWS3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
RFX6Q8HWS3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.92■■□□□ 1.58
RFX6Q8HWS3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.92■■□□□ 1.58
RFX6Q8HWS3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFX6Q8HWS3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFX6Q8HWS3 MIR4449-201ENST00000578365 66 ntBASIC24.91■■□□□ 1.58
RFX6Q8HWS3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
RFX6Q8HWS3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RFX6Q8HWS3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 ECEL1P2-201ENST00000461596 1295 ntBASIC24.9■■□□□ 1.58
RFX6Q8HWS3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
RFX6Q8HWS3 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.89■■□□□ 1.58
RFX6Q8HWS3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.89■■□□□ 1.58
RFX6Q8HWS3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
RFX6Q8HWS3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
RFX6Q8HWS3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.89■■□□□ 1.57
RFX6Q8HWS3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.88■■□□□ 1.57
RFX6Q8HWS3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RFX6Q8HWS3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
RFX6Q8HWS3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFX6Q8HWS3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.88■■□□□ 1.57
RFX6Q8HWS3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RFX6Q8HWS3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
RFX6Q8HWS3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
RFX6Q8HWS3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFX6Q8HWS3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RFX6Q8HWS3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RFX6Q8HWS3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFX6Q8HWS3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RFX6Q8HWS3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RFX6Q8HWS3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
RFX6Q8HWS3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
RFX6Q8HWS3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.83■■□□□ 1.57
RFX6Q8HWS3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.57
RFX6Q8HWS3 GPX1-201ENST00000419349 1106 ntBASIC24.83■■□□□ 1.57
RFX6Q8HWS3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.83■■□□□ 1.57
RFX6Q8HWS3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
RFX6Q8HWS3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
RFX6Q8HWS3 RP9P-202ENST00000450133 1212 ntBASIC24.81■■□□□ 1.56
RFX6Q8HWS3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
RFX6Q8HWS3 AC097639.1-201ENST00000565519 1891 ntBASIC24.79■■□□□ 1.56
RFX6Q8HWS3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
RFX6Q8HWS3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
RFX6Q8HWS3 AC093536.1-201ENST00000569153 554 ntBASIC24.79■■□□□ 1.56
RFX6Q8HWS3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.79■■□□□ 1.56
RFX6Q8HWS3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.79■■□□□ 1.56
RFX6Q8HWS3 AC022211.4-201ENST00000625094 2161 ntBASIC24.78■■□□□ 1.56
RFX6Q8HWS3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFX6Q8HWS3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFX6Q8HWS3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
RFX6Q8HWS3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms