Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rsph6aQ8CDR2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.77■■■□□ 2.2
Rsph6aQ8CDR2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rsph6aQ8CDR2 Gm6934-201ENSMUST00000194780 1905 ntBASIC28.77■■■□□ 2.2
Rsph6aQ8CDR2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Rsph6aQ8CDR2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Rsph6aQ8CDR2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 Gm45102-201ENSMUST00000207427 857 ntBASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 Rps24-207ENSMUST00000224568 714 ntBASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 Gm10232-201ENSMUST00000089221 720 ntBASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rsph6aQ8CDR2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC28.75■■■□□ 2.19
Rsph6aQ8CDR2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rsph6aQ8CDR2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Rsph6aQ8CDR2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Rsph6aQ8CDR2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rsph6aQ8CDR2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
Rsph6aQ8CDR2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
Rsph6aQ8CDR2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Rsph6aQ8CDR2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rsph6aQ8CDR2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rsph6aQ8CDR2 Gm9959-201ENSMUST00000068277 390 ntBASIC28.73■■■□□ 2.19
Rsph6aQ8CDR2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Rsph6aQ8CDR2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rsph6aQ8CDR2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rsph6aQ8CDR2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rsph6aQ8CDR2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rsph6aQ8CDR2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rsph6aQ8CDR2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rsph6aQ8CDR2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Rsph6aQ8CDR2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rsph6aQ8CDR2 Gm16464-201ENSMUST00000117815 1095 ntBASIC28.7■■■□□ 2.18
Rsph6aQ8CDR2 Gm14117-201ENSMUST00000122417 843 ntBASIC28.7■■■□□ 2.18
Rsph6aQ8CDR2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rsph6aQ8CDR2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Rsph6aQ8CDR2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rsph6aQ8CDR2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rsph6aQ8CDR2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Rsph6aQ8CDR2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Rsph6aQ8CDR2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC28.68■■■□□ 2.18
Rsph6aQ8CDR2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC28.67■■■□□ 2.18
Rsph6aQ8CDR2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
Rsph6aQ8CDR2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
Rsph6aQ8CDR2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rsph6aQ8CDR2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC28.66■■■□□ 2.18
Rsph6aQ8CDR2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rsph6aQ8CDR2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC28.66■■■□□ 2.18
Rsph6aQ8CDR2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rsph6aQ8CDR2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Rsph6aQ8CDR2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC28.65■■■□□ 2.18
Rsph6aQ8CDR2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rsph6aQ8CDR2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
Rsph6aQ8CDR2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rsph6aQ8CDR2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rsph6aQ8CDR2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rsph6aQ8CDR2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rsph6aQ8CDR2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rsph6aQ8CDR2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rsph6aQ8CDR2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rsph6aQ8CDR2 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rsph6aQ8CDR2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rsph6aQ8CDR2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC28.6■■■□□ 2.17
Rsph6aQ8CDR2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rsph6aQ8CDR2 Gm28536-201ENSMUST00000190971 1317 ntBASIC28.6■■■□□ 2.17
Rsph6aQ8CDR2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rsph6aQ8CDR2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rsph6aQ8CDR2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Rsph6aQ8CDR2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rsph6aQ8CDR2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rsph6aQ8CDR2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rsph6aQ8CDR2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rsph6aQ8CDR2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rsph6aQ8CDR2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Rsph6aQ8CDR2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rsph6aQ8CDR2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Rsph6aQ8CDR2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC28.56■■■□□ 2.16
Rsph6aQ8CDR2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC28.56■■■□□ 2.16
Rsph6aQ8CDR2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC28.56■■■□□ 2.16
Rsph6aQ8CDR2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rsph6aQ8CDR2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rsph6aQ8CDR2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rsph6aQ8CDR2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rsph6aQ8CDR2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rsph6aQ8CDR2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC28.54■■■□□ 2.16
Rsph6aQ8CDR2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC28.54■■■□□ 2.16
Rsph6aQ8CDR2 Gm5131-201ENSMUST00000212776 1238 ntBASIC28.54■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms