Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SynpoQ8CC35 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SynpoQ8CC35 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SynpoQ8CC35 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SynpoQ8CC35 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SynpoQ8CC35 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SynpoQ8CC35 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SynpoQ8CC35 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SynpoQ8CC35 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SynpoQ8CC35 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SynpoQ8CC35 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.87■□□□□ 0.93
SynpoQ8CC35 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SynpoQ8CC35 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SynpoQ8CC35 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SynpoQ8CC35 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SynpoQ8CC35 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SynpoQ8CC35 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SynpoQ8CC35 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SynpoQ8CC35 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SynpoQ8CC35 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SynpoQ8CC35 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SynpoQ8CC35 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SynpoQ8CC35 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SynpoQ8CC35 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.83■□□□□ 0.93
SynpoQ8CC35 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.83■□□□□ 0.92
SynpoQ8CC35 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SynpoQ8CC35 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SynpoQ8CC35 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SynpoQ8CC35 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SynpoQ8CC35 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.82■□□□□ 0.92
SynpoQ8CC35 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SynpoQ8CC35 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SynpoQ8CC35 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SynpoQ8CC35 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SynpoQ8CC35 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SynpoQ8CC35 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SynpoQ8CC35 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SynpoQ8CC35 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SynpoQ8CC35 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SynpoQ8CC35 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SynpoQ8CC35 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SynpoQ8CC35 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SynpoQ8CC35 Gm5812-201ENSMUST00000061073 957 ntBASIC20.79■□□□□ 0.92
SynpoQ8CC35 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SynpoQ8CC35 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SynpoQ8CC35 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SynpoQ8CC35 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SynpoQ8CC35 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SynpoQ8CC35 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SynpoQ8CC35 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SynpoQ8CC35 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SynpoQ8CC35 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SynpoQ8CC35 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SynpoQ8CC35 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SynpoQ8CC35 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SynpoQ8CC35 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SynpoQ8CC35 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SynpoQ8CC35 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SynpoQ8CC35 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms