Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cfap54Q8C6S9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cfap54Q8C6S9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cfap54Q8C6S9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cfap54Q8C6S9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cfap54Q8C6S9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 Golgb1-201ENSMUST00000023534 498 ntBASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.33■■□□□ 1.01
Cfap54Q8C6S9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cfap54Q8C6S9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cfap54Q8C6S9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cfap54Q8C6S9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cfap54Q8C6S9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cfap54Q8C6S9 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.32■■□□□ 1
Cfap54Q8C6S9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cfap54Q8C6S9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.32■■□□□ 1
Cfap54Q8C6S9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cfap54Q8C6S9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cfap54Q8C6S9 Gm12821-201ENSMUST00000120022 600 ntBASIC21.3■■□□□ 1
Cfap54Q8C6S9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.3■■□□□ 1
Cfap54Q8C6S9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cfap54Q8C6S9 Gm40881-201ENSMUST00000223397 166 ntBASIC21.29■■□□□ 1
Cfap54Q8C6S9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cfap54Q8C6S9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.29■■□□□ 1
Cfap54Q8C6S9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.28■■□□□ 1
Cfap54Q8C6S9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cfap54Q8C6S9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cfap54Q8C6S9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
Cfap54Q8C6S9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cfap54Q8C6S9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cfap54Q8C6S9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.24■□□□□ 0.99
Cfap54Q8C6S9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cfap54Q8C6S9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cfap54Q8C6S9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap54Q8C6S9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.21■□□□□ 0.99
Cfap54Q8C6S9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cfap54Q8C6S9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cfap54Q8C6S9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cfap54Q8C6S9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap54Q8C6S9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.18■□□□□ 0.98
Cfap54Q8C6S9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cfap54Q8C6S9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cfap54Q8C6S9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms