Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Scfd1Q8BRF7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scfd1Q8BRF7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scfd1Q8BRF7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Scfd1Q8BRF7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Gm45102-201ENSMUST00000207427 857 ntBASIC25.18■■□□□ 1.62
Scfd1Q8BRF7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Scfd1Q8BRF7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.16■■□□□ 1.62
Scfd1Q8BRF7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Scfd1Q8BRF7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Gm9959-201ENSMUST00000068277 390 ntBASIC25.14■■□□□ 1.62
Scfd1Q8BRF7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Scfd1Q8BRF7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Scfd1Q8BRF7 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.13■■□□□ 1.61
Scfd1Q8BRF7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Gm14117-201ENSMUST00000122417 843 ntBASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scfd1Q8BRF7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Scfd1Q8BRF7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC25.1■■□□□ 1.61
Scfd1Q8BRF7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Scfd1Q8BRF7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Scfd1Q8BRF7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Scfd1Q8BRF7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Scfd1Q8BRF7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Scfd1Q8BRF7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scfd1Q8BRF7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Scfd1Q8BRF7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Scfd1Q8BRF7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Scfd1Q8BRF7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Scfd1Q8BRF7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Scfd1Q8BRF7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Scfd1Q8BRF7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Scfd1Q8BRF7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scfd1Q8BRF7 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25■■□□□ 1.59
Scfd1Q8BRF7 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Scfd1Q8BRF7 Etf1-202ENSMUST00000180351 108 ntBASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Scfd1Q8BRF7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Scfd1Q8BRF7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms