Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.22■■□□□ 1.15
VRK2Q86Y07 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.22■■□□□ 1.15
VRK2Q86Y07 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VRK2Q86Y07 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRK2Q86Y07 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
VRK2Q86Y07 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.21■■□□□ 1.15
VRK2Q86Y07 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VRK2Q86Y07 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
VRK2Q86Y07 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
VRK2Q86Y07 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
VRK2Q86Y07 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
VRK2Q86Y07 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.2■■□□□ 1.14
VRK2Q86Y07 AC092296.2-201ENST00000589470 999 ntBASIC22.2■■□□□ 1.14
VRK2Q86Y07 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
VRK2Q86Y07 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
VRK2Q86Y07 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
VRK2Q86Y07 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.19■■□□□ 1.14
VRK2Q86Y07 AC022413.1-201ENST00000624602 984 ntBASIC22.19■■□□□ 1.14
VRK2Q86Y07 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
VRK2Q86Y07 SMPD5-203ENST00000639008 1464 ntBASIC22.19■■□□□ 1.14
VRK2Q86Y07 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.19■■□□□ 1.14
VRK2Q86Y07 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
VRK2Q86Y07 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
VRK2Q86Y07 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
VRK2Q86Y07 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VRK2Q86Y07 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.18■■□□□ 1.14
VRK2Q86Y07 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
VRK2Q86Y07 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.17■■□□□ 1.14
VRK2Q86Y07 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
VRK2Q86Y07 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.17■■□□□ 1.14
VRK2Q86Y07 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VRK2Q86Y07 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VRK2Q86Y07 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
VRK2Q86Y07 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.16■■□□□ 1.14
VRK2Q86Y07 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.16■■□□□ 1.14
VRK2Q86Y07 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.16■■□□□ 1.14
VRK2Q86Y07 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.16■■□□□ 1.14
VRK2Q86Y07 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.15■■□□□ 1.14
VRK2Q86Y07 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.15■■□□□ 1.14
VRK2Q86Y07 MIR3960-201ENST00000583311 91 ntBASIC22.15■■□□□ 1.14
VRK2Q86Y07 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 AC022211.4-201ENST00000625094 2161 ntBASIC22.15■■□□□ 1.14
VRK2Q86Y07 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VRK2Q86Y07 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
VRK2Q86Y07 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRK2Q86Y07 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.14■■□□□ 1.13
VRK2Q86Y07 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
VRK2Q86Y07 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VRK2Q86Y07 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
VRK2Q86Y07 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VRK2Q86Y07 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VRK2Q86Y07 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.13■■□□□ 1.13
VRK2Q86Y07 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VRK2Q86Y07 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
VRK2Q86Y07 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 AC142381.3-201ENST00000568208 1670 ntBASIC22.12■■□□□ 1.13
VRK2Q86Y07 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
VRK2Q86Y07 ECEL1P2-201ENST00000461596 1295 ntBASIC22.12■■□□□ 1.13
VRK2Q86Y07 MIR4449-201ENST00000578365 66 ntBASIC22.12■■□□□ 1.13
VRK2Q86Y07 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
VRK2Q86Y07 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VRK2Q86Y07 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.12■■□□□ 1.13
VRK2Q86Y07 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
VRK2Q86Y07 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRK2Q86Y07 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.11■■□□□ 1.13
VRK2Q86Y07 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
VRK2Q86Y07 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRK2Q86Y07 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.11■■□□□ 1.13
VRK2Q86Y07 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VRK2Q86Y07 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.11■■□□□ 1.13
VRK2Q86Y07 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
VRK2Q86Y07 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VRK2Q86Y07 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VRK2Q86Y07 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VRK2Q86Y07 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VRK2Q86Y07 AC138932.3-201ENST00000567634 1902 ntBASIC22.1■■□□□ 1.13
VRK2Q86Y07 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.09■■□□□ 1.13
VRK2Q86Y07 AC097639.1-201ENST00000565519 1891 ntBASIC22.09■■□□□ 1.13
VRK2Q86Y07 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.09■■□□□ 1.13
VRK2Q86Y07 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VRK2Q86Y07 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VRK2Q86Y07 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
VRK2Q86Y07 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms