Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SYVN1Q86TM6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYVN1Q86TM6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.57■■□□□ 1.36
SYVN1Q86TM6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYVN1Q86TM6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SYVN1Q86TM6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SYVN1Q86TM6 AL157400.5-201ENST00000507624 621 ntBASIC23.56■■□□□ 1.36
SYVN1Q86TM6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.56■■□□□ 1.36
SYVN1Q86TM6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SYVN1Q86TM6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.55■■□□□ 1.36
SYVN1Q86TM6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYVN1Q86TM6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYVN1Q86TM6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYVN1Q86TM6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SYVN1Q86TM6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SYVN1Q86TM6 KRT18P60-201ENST00000312876 1297 ntBASIC23.54■■□□□ 1.36
SYVN1Q86TM6 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.54■■□□□ 1.36
SYVN1Q86TM6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SYVN1Q86TM6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SYVN1Q86TM6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SYVN1Q86TM6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SYVN1Q86TM6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
SYVN1Q86TM6 TSPY13P-201ENST00000338964 914 ntBASIC23.52■■□□□ 1.36
SYVN1Q86TM6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SYVN1Q86TM6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 AC096887.2-201ENST00000623443 1957 ntBASIC23.51■■□□□ 1.35
SYVN1Q86TM6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
SYVN1Q86TM6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SYVN1Q86TM6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SYVN1Q86TM6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.5■■□□□ 1.35
SYVN1Q86TM6 AC007029.1-201ENST00000604183 313 ntBASIC23.5■■□□□ 1.35
SYVN1Q86TM6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.5■■□□□ 1.35
SYVN1Q86TM6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SYVN1Q86TM6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SYVN1Q86TM6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
SYVN1Q86TM6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
SYVN1Q86TM6 AC004987.1-201ENST00000428627 508 ntBASIC23.48■■□□□ 1.35
SYVN1Q86TM6 ATP5G2P3-201ENST00000429083 425 ntBASIC23.48■■□□□ 1.35
SYVN1Q86TM6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
SYVN1Q86TM6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SYVN1Q86TM6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SYVN1Q86TM6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
SYVN1Q86TM6 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.45■■□□□ 1.34
SYVN1Q86TM6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.45■■□□□ 1.34
SYVN1Q86TM6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.45■■□□□ 1.34
SYVN1Q86TM6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.45■■□□□ 1.34
SYVN1Q86TM6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
SYVN1Q86TM6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.43■■□□□ 1.34
SYVN1Q86TM6 SMPD5-203ENST00000639008 1464 ntBASIC23.43■■□□□ 1.34
SYVN1Q86TM6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
SYVN1Q86TM6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SYVN1Q86TM6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms