Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CROCCP2Q86T23 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CROCCP2Q86T23 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CROCCP2Q86T23 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CROCCP2Q86T23 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CROCCP2Q86T23 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 AC068473.5-201ENST00000616428 2072 ntBASIC24.32■■□□□ 1.48
CROCCP2Q86T23 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CROCCP2Q86T23 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.31■■□□□ 1.48
CROCCP2Q86T23 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CROCCP2Q86T23 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.31■■□□□ 1.48
CROCCP2Q86T23 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CROCCP2Q86T23 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CROCCP2Q86T23 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CROCCP2Q86T23 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.3■■□□□ 1.48
CROCCP2Q86T23 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.3■■□□□ 1.48
CROCCP2Q86T23 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CROCCP2Q86T23 SUZ12P1-203ENST00000578195 985 ntBASIC24.3■■□□□ 1.48
CROCCP2Q86T23 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CROCCP2Q86T23 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CROCCP2Q86T23 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CROCCP2Q86T23 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CROCCP2Q86T23 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CROCCP2Q86T23 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.27■■□□□ 1.48
CROCCP2Q86T23 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CROCCP2Q86T23 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CROCCP2Q86T23 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CROCCP2Q86T23 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
CROCCP2Q86T23 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.26■■□□□ 1.47
CROCCP2Q86T23 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CROCCP2Q86T23 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CROCCP2Q86T23 AC079834.2-201ENST00000609776 1949 ntBASIC24.24■■□□□ 1.47
CROCCP2Q86T23 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CROCCP2Q86T23 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.23■■□□□ 1.47
CROCCP2Q86T23 DUX4L28-201ENST00000623687 678 ntBASIC24.23■■□□□ 1.47
CROCCP2Q86T23 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CROCCP2Q86T23 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CROCCP2Q86T23 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.23■■□□□ 1.47
CROCCP2Q86T23 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CROCCP2Q86T23 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CROCCP2Q86T23 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.22■■□□□ 1.47
CROCCP2Q86T23 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.22■■□□□ 1.47
CROCCP2Q86T23 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.22■■□□□ 1.47
CROCCP2Q86T23 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CROCCP2Q86T23 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CROCCP2Q86T23 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.21■■□□□ 1.47
CROCCP2Q86T23 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CROCCP2Q86T23 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CROCCP2Q86T23 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CROCCP2Q86T23 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CROCCP2Q86T23 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms