Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.7■■□□□ 1.06
Trappc6aQ78XR0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trappc6aQ78XR0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trappc6aQ78XR0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trappc6aQ78XR0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.68■■□□□ 1.06
Trappc6aQ78XR0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trappc6aQ78XR0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trappc6aQ78XR0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trappc6aQ78XR0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trappc6aQ78XR0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Trappc6aQ78XR0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Trappc6aQ78XR0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.67■■□□□ 1.06
Trappc6aQ78XR0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trappc6aQ78XR0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trappc6aQ78XR0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trappc6aQ78XR0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trappc6aQ78XR0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.66■■□□□ 1.06
Trappc6aQ78XR0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trappc6aQ78XR0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.65■■□□□ 1.06
Trappc6aQ78XR0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trappc6aQ78XR0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trappc6aQ78XR0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trappc6aQ78XR0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Trappc6aQ78XR0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trappc6aQ78XR0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trappc6aQ78XR0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trappc6aQ78XR0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trappc6aQ78XR0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trappc6aQ78XR0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trappc6aQ78XR0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trappc6aQ78XR0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.62■■□□□ 1.05
Trappc6aQ78XR0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trappc6aQ78XR0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trappc6aQ78XR0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trappc6aQ78XR0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trappc6aQ78XR0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trappc6aQ78XR0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trappc6aQ78XR0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.61■■□□□ 1.05
Trappc6aQ78XR0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trappc6aQ78XR0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Gm13241-201ENSMUST00000094493 780 ntBASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trappc6aQ78XR0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.59■■□□□ 1.05
Trappc6aQ78XR0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
Trappc6aQ78XR0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.58■■□□□ 1.05
Trappc6aQ78XR0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Trappc6aQ78XR0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trappc6aQ78XR0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Gm40881-201ENSMUST00000223397 166 ntBASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Gm9847-201ENSMUST00000052528 599 ntBASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trappc6aQ78XR0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trappc6aQ78XR0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Gm22238-201ENSMUST00000175222 88 ntBASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trappc6aQ78XR0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trappc6aQ78XR0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trappc6aQ78XR0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trappc6aQ78XR0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trappc6aQ78XR0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.54■■□□□ 1.04
Trappc6aQ78XR0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trappc6aQ78XR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms