Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sqstm1Q64337 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.33■□□□□ 0.69
Sqstm1Q64337 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sqstm1Q64337 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sqstm1Q64337 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sqstm1Q64337 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sqstm1Q64337 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sqstm1Q64337 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sqstm1Q64337 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sqstm1Q64337 Gm24970-201ENSMUST00000175582 82 ntBASIC19.32■□□□□ 0.68
Sqstm1Q64337 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sqstm1Q64337 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sqstm1Q64337 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sqstm1Q64337 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sqstm1Q64337 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.31■□□□□ 0.68
Sqstm1Q64337 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.31■□□□□ 0.68
Sqstm1Q64337 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sqstm1Q64337 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sqstm1Q64337 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sqstm1Q64337 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sqstm1Q64337 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sqstm1Q64337 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sqstm1Q64337 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sqstm1Q64337 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sqstm1Q64337 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sqstm1Q64337 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.29■□□□□ 0.68
Sqstm1Q64337 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sqstm1Q64337 Gm45855-201ENSMUST00000212546 880 ntBASIC19.29■□□□□ 0.68
Sqstm1Q64337 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sqstm1Q64337 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Sqstm1Q64337 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sqstm1Q64337 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.27■□□□□ 0.68
Sqstm1Q64337 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Sqstm1Q64337 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sqstm1Q64337 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sqstm1Q64337 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.25■□□□□ 0.67
Sqstm1Q64337 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sqstm1Q64337 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.24■□□□□ 0.67
Sqstm1Q64337 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sqstm1Q64337 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sqstm1Q64337 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sqstm1Q64337 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sqstm1Q64337 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sqstm1Q64337 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.22■□□□□ 0.67
Sqstm1Q64337 Gm37136-201ENSMUST00000194368 194 ntBASIC19.22■□□□□ 0.67
Sqstm1Q64337 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sqstm1Q64337 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sqstm1Q64337 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sqstm1Q64337 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sqstm1Q64337 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sqstm1Q64337 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sqstm1Q64337 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sqstm1Q64337 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sqstm1Q64337 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sqstm1Q64337 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sqstm1Q64337 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sqstm1Q64337 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sqstm1Q64337 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Sqstm1Q64337 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sqstm1Q64337 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sqstm1Q64337 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sqstm1Q64337 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Sqstm1Q64337 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Sqstm1Q64337 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms