Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
AtmQ62388 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AtmQ62388 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AtmQ62388 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
AtmQ62388 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
AtmQ62388 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
AtmQ62388 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
AtmQ62388 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AtmQ62388 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.12■□□□□ 0.97
AtmQ62388 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AtmQ62388 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AtmQ62388 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AtmQ62388 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AtmQ62388 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
AtmQ62388 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AtmQ62388 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AtmQ62388 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
AtmQ62388 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
AtmQ62388 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
AtmQ62388 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AtmQ62388 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.1■□□□□ 0.97
AtmQ62388 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
AtmQ62388 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AtmQ62388 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
AtmQ62388 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
AtmQ62388 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.08■□□□□ 0.96
AtmQ62388 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
AtmQ62388 Gm40881-201ENSMUST00000223397 166 ntBASIC21.08■□□□□ 0.96
AtmQ62388 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.07■□□□□ 0.96
AtmQ62388 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
AtmQ62388 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
AtmQ62388 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AtmQ62388 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
AtmQ62388 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AtmQ62388 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AtmQ62388 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AtmQ62388 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.06■□□□□ 0.96
AtmQ62388 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AtmQ62388 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.05■□□□□ 0.96
AtmQ62388 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AtmQ62388 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AtmQ62388 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AtmQ62388 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
AtmQ62388 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
AtmQ62388 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.04■□□□□ 0.96
AtmQ62388 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AtmQ62388 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.04■□□□□ 0.96
AtmQ62388 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.03■□□□□ 0.96
AtmQ62388 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AtmQ62388 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AtmQ62388 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
AtmQ62388 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
AtmQ62388 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AtmQ62388 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.03■□□□□ 0.96
AtmQ62388 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AtmQ62388 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.02■□□□□ 0.96
AtmQ62388 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AtmQ62388 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.01■□□□□ 0.95
AtmQ62388 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.01■□□□□ 0.95
AtmQ62388 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AtmQ62388 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
AtmQ62388 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21■□□□□ 0.95
AtmQ62388 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
AtmQ62388 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AtmQ62388 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
AtmQ62388 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.99■□□□□ 0.95
AtmQ62388 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.99■□□□□ 0.95
AtmQ62388 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AtmQ62388 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.99■□□□□ 0.95
AtmQ62388 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AtmQ62388 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.99■□□□□ 0.95
AtmQ62388 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.99■□□□□ 0.95
AtmQ62388 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
AtmQ62388 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.98■□□□□ 0.95
AtmQ62388 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.98■□□□□ 0.95
AtmQ62388 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.98■□□□□ 0.95
AtmQ62388 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AtmQ62388 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
AtmQ62388 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
AtmQ62388 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms