Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx4Q61496 Gm40881-201ENSMUST00000223397 166 ntBASIC24.34■■□□□ 1.49
Ddx4Q61496 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx4Q61496 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx4Q61496 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Ddx4Q61496 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ddx4Q61496 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ddx4Q61496 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Ddx4Q61496 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.32■■□□□ 1.48
Ddx4Q61496 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
Ddx4Q61496 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.32■■□□□ 1.48
Ddx4Q61496 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx4Q61496 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ddx4Q61496 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.3■■□□□ 1.48
Ddx4Q61496 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx4Q61496 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx4Q61496 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx4Q61496 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.3■■□□□ 1.48
Ddx4Q61496 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.3■■□□□ 1.48
Ddx4Q61496 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.3■■□□□ 1.48
Ddx4Q61496 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx4Q61496 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ddx4Q61496 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.29■■□□□ 1.48
Ddx4Q61496 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ddx4Q61496 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx4Q61496 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.29■■□□□ 1.48
Ddx4Q61496 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx4Q61496 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Ddx4Q61496 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx4Q61496 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.28■■□□□ 1.48
Ddx4Q61496 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Ddx4Q61496 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx4Q61496 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.27■■□□□ 1.48
Ddx4Q61496 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.26■■□□□ 1.47
Ddx4Q61496 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.26■■□□□ 1.47
Ddx4Q61496 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
Ddx4Q61496 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.26■■□□□ 1.47
Ddx4Q61496 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ddx4Q61496 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx4Q61496 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx4Q61496 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx4Q61496 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx4Q61496 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx4Q61496 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx4Q61496 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.24■■□□□ 1.47
Ddx4Q61496 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
Ddx4Q61496 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx4Q61496 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Ddx4Q61496 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx4Q61496 Gm12922-201ENSMUST00000120626 809 ntBASIC24.23■■□□□ 1.47
Ddx4Q61496 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx4Q61496 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx4Q61496 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Ddx4Q61496 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx4Q61496 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx4Q61496 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx4Q61496 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.22■■□□□ 1.47
Ddx4Q61496 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx4Q61496 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx4Q61496 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.21■■□□□ 1.47
Ddx4Q61496 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx4Q61496 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx4Q61496 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.2■■□□□ 1.46
Ddx4Q61496 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx4Q61496 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Ddx4Q61496 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx4Q61496 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx4Q61496 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx4Q61496 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx4Q61496 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx4Q61496 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.19■■□□□ 1.46
Ddx4Q61496 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx4Q61496 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx4Q61496 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx4Q61496 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.18■■□□□ 1.46
Ddx4Q61496 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.18■■□□□ 1.46
Ddx4Q61496 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
Ddx4Q61496 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx4Q61496 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx4Q61496 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx4Q61496 Gm12821-201ENSMUST00000120022 600 ntBASIC24.17■■□□□ 1.46
Ddx4Q61496 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.17■■□□□ 1.46
Ddx4Q61496 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx4Q61496 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx4Q61496 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx4Q61496 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx4Q61496 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx4Q61496 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx4Q61496 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx4Q61496 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx4Q61496 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Ddx4Q61496 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Ddx4Q61496 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.15■■□□□ 1.46
Ddx4Q61496 Gm10399-202ENSMUST00000202768 748 ntBASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms