Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scarb1Q61009 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Scarb1Q61009 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.26■□□□□ 0.51
Scarb1Q61009 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scarb1Q61009 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scarb1Q61009 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scarb1Q61009 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Scarb1Q61009 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scarb1Q61009 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Scarb1Q61009 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scarb1Q61009 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Scarb1Q61009 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Scarb1Q61009 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.24■□□□□ 0.51
Scarb1Q61009 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Scarb1Q61009 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Scarb1Q61009 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scarb1Q61009 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scarb1Q61009 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.23■□□□□ 0.51
Scarb1Q61009 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Scarb1Q61009 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Scarb1Q61009 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.23■□□□□ 0.51
Scarb1Q61009 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scarb1Q61009 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scarb1Q61009 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scarb1Q61009 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scarb1Q61009 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Scarb1Q61009 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scarb1Q61009 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scarb1Q61009 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scarb1Q61009 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Scarb1Q61009 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scarb1Q61009 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Scarb1Q61009 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scarb1Q61009 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.2■□□□□ 0.5
Scarb1Q61009 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Scarb1Q61009 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.2■□□□□ 0.5
Scarb1Q61009 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.2■□□□□ 0.5
Scarb1Q61009 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.2■□□□□ 0.5
Scarb1Q61009 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scarb1Q61009 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Scarb1Q61009 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scarb1Q61009 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scarb1Q61009 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scarb1Q61009 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scarb1Q61009 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Scarb1Q61009 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Scarb1Q61009 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scarb1Q61009 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.18■□□□□ 0.5
Scarb1Q61009 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scarb1Q61009 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scarb1Q61009 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scarb1Q61009 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scarb1Q61009 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scarb1Q61009 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scarb1Q61009 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scarb1Q61009 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scarb1Q61009 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.16■□□□□ 0.5
Scarb1Q61009 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scarb1Q61009 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scarb1Q61009 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scarb1Q61009 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scarb1Q61009 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scarb1Q61009 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.15■□□□□ 0.5
Scarb1Q61009 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.15■□□□□ 0.5
Scarb1Q61009 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scarb1Q61009 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scarb1Q61009 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scarb1Q61009 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scarb1Q61009 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scarb1Q61009 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scarb1Q61009 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.13■□□□□ 0.49
Scarb1Q61009 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scarb1Q61009 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scarb1Q61009 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scarb1Q61009 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scarb1Q61009 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scarb1Q61009 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scarb1Q61009 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scarb1Q61009 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scarb1Q61009 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scarb1Q61009 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Scarb1Q61009 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scarb1Q61009 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scarb1Q61009 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scarb1Q61009 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scarb1Q61009 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scarb1Q61009 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scarb1Q61009 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scarb1Q61009 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scarb1Q61009 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scarb1Q61009 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scarb1Q61009 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scarb1Q61009 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.1■□□□□ 0.49
Scarb1Q61009 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms