Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfaip3Q60769 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tnfaip3Q60769 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tnfaip3Q60769 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfaip3Q60769 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfaip3Q60769 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfaip3Q60769 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.39■□□□□ 0.85
Tnfaip3Q60769 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Tnfaip3Q60769 Gm5812-201ENSMUST00000061073 957 ntBASIC20.39■□□□□ 0.85
Tnfaip3Q60769 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfaip3Q60769 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfaip3Q60769 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfaip3Q60769 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfaip3Q60769 Gm13238-201ENSMUST00000117655 780 ntBASIC20.38■□□□□ 0.85
Tnfaip3Q60769 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Tnfaip3Q60769 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.38■□□□□ 0.85
Tnfaip3Q60769 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.37■□□□□ 0.85
Tnfaip3Q60769 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfaip3Q60769 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.37■□□□□ 0.85
Tnfaip3Q60769 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfaip3Q60769 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tnfaip3Q60769 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfaip3Q60769 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip3Q60769 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tnfaip3Q60769 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip3Q60769 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfaip3Q60769 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.36■□□□□ 0.85
Tnfaip3Q60769 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tnfaip3Q60769 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfaip3Q60769 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfaip3Q60769 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.33■□□□□ 0.85
Tnfaip3Q60769 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfaip3Q60769 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.33■□□□□ 0.85
Tnfaip3Q60769 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfaip3Q60769 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfaip3Q60769 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tnfaip3Q60769 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfaip3Q60769 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfaip3Q60769 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfaip3Q60769 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfaip3Q60769 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tnfaip3Q60769 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tnfaip3Q60769 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Tnfaip3Q60769 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms