Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HLA-DQA1Q5Y7H0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
HLA-DQA1Q5Y7H0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.37■■□□□ 1.17
HLA-DQA1Q5Y7H0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HLA-DQA1Q5Y7H0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 AC018755.3-202ENST00000596210 929 ntBASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 AC092803.2-201ENST00000564287 1899 ntBASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HLA-DQA1Q5Y7H0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HLA-DQA1Q5Y7H0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HLA-DQA1Q5Y7H0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HLA-DQA1Q5Y7H0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.35■■□□□ 1.17
HLA-DQA1Q5Y7H0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HLA-DQA1Q5Y7H0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HLA-DQA1Q5Y7H0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
HLA-DQA1Q5Y7H0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
HLA-DQA1Q5Y7H0 AC129492.7-201ENST00000622992 756 ntBASIC22.33■■□□□ 1.17
HLA-DQA1Q5Y7H0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
HLA-DQA1Q5Y7H0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA1Q5Y7H0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA1Q5Y7H0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.32■■□□□ 1.16
HLA-DQA1Q5Y7H0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.32■■□□□ 1.16
HLA-DQA1Q5Y7H0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.32■■□□□ 1.16
HLA-DQA1Q5Y7H0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
HLA-DQA1Q5Y7H0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HLA-DQA1Q5Y7H0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HLA-DQA1Q5Y7H0 KRT18P10-201ENST00000388836 1287 ntBASIC22.31■■□□□ 1.16
HLA-DQA1Q5Y7H0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HLA-DQA1Q5Y7H0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HLA-DQA1Q5Y7H0 AC012354.3-201ENST00000623734 483 ntBASIC22.31■■□□□ 1.16
HLA-DQA1Q5Y7H0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.3■■□□□ 1.16
HLA-DQA1Q5Y7H0 MIR6765-201ENST00000614092 87 ntBASIC22.3■■□□□ 1.16
HLA-DQA1Q5Y7H0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DQA1Q5Y7H0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HLA-DQA1Q5Y7H0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.3■■□□□ 1.16
HLA-DQA1Q5Y7H0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 DUX4L9-201ENST00000449051 1259 ntBASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HLA-DQA1Q5Y7H0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.28■■□□□ 1.16
HLA-DQA1Q5Y7H0 ERN1-208ENST00000606895 2068 ntBASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 AC091060.1-201ENST00000623524 1766 ntBASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HLA-DQA1Q5Y7H0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DQA1Q5Y7H0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DQA1Q5Y7H0 SPCS2P3-201ENST00000500401 656 ntBASIC22.26■■□□□ 1.15
HLA-DQA1Q5Y7H0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.26■■□□□ 1.15
HLA-DQA1Q5Y7H0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HLA-DQA1Q5Y7H0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
HLA-DQA1Q5Y7H0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 AC010501.1-201ENST00000606270 1962 ntBASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 ATP5G2P3-201ENST00000429083 425 ntBASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 DUX4L18-201ENST00000553347 1267 ntBASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
HLA-DQA1Q5Y7H0 AC145676.1-201ENST00000514988 2004 ntBASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 TSPY13P-201ENST00000338964 914 ntBASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 AC004987.1-201ENST00000428627 508 ntBASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HLA-DQA1Q5Y7H0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DQA1Q5Y7H0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DQA1Q5Y7H0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HLA-DQA1Q5Y7H0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.23■■□□□ 1.15
HLA-DQA1Q5Y7H0 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.23■■□□□ 1.15
HLA-DQA1Q5Y7H0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms