Protein–RNA interactions for Protein: Q53H64

LINC00483, Putative uncharacterized protein encoded by LINC00483, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00483Q53H64 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00483Q53H64 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00483Q53H64 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00483Q53H64 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC00483Q53H64 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.41□□□□□ -0.1
LINC00483Q53H64 AC097639.1-201ENST00000565519 1891 ntBASIC14.4□□□□□ -0.1
LINC00483Q53H64 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00483Q53H64 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00483Q53H64 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00483Q53H64 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00483Q53H64 SMPD5-203ENST00000639008 1464 ntBASIC14.4□□□□□ -0.1
LINC00483Q53H64 ECEL1P2-201ENST00000461596 1295 ntBASIC14.4□□□□□ -0.1
LINC00483Q53H64 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00483Q53H64 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC00483Q53H64 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC00483Q53H64 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00483Q53H64 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00483Q53H64 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00483Q53H64 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC14.39□□□□□ -0.11
LINC00483Q53H64 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC00483Q53H64 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00483Q53H64 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC00483Q53H64 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC00483Q53H64 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00483Q53H64 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00483Q53H64 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00483Q53H64 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00483Q53H64 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LINC00483Q53H64 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC00483Q53H64 AC022211.4-201ENST00000625094 2161 ntBASIC14.38□□□□□ -0.11
LINC00483Q53H64 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00483Q53H64 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC00483Q53H64 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LINC00483Q53H64 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC00483Q53H64 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
LINC00483Q53H64 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00483Q53H64 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC00483Q53H64 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LINC00483Q53H64 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC00483Q53H64 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00483Q53H64 AC135731.1-201ENST00000569415 2548 ntBASIC14.36□□□□□ -0.11
LINC00483Q53H64 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC00483Q53H64 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC00483Q53H64 MED17-227ENST00000640521 2047 ntTSL 5 BASIC14.36□□□□□ -0.11
LINC00483Q53H64 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
LINC00483Q53H64 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00483Q53H64 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00483Q53H64 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.35□□□□□ -0.11
LINC00483Q53H64 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00483Q53H64 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 AC022413.1-201ENST00000624602 984 ntBASIC14.35□□□□□ -0.11
LINC00483Q53H64 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00483Q53H64 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC14.34□□□□□ -0.11
LINC00483Q53H64 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LINC00483Q53H64 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 RP9P-202ENST00000450133 1212 ntBASIC14.34□□□□□ -0.11
LINC00483Q53H64 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
LINC00483Q53H64 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00483Q53H64 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00483Q53H64 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00483Q53H64 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00483Q53H64 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00483Q53H64 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00483Q53H64 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00483Q53H64 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00483Q53H64 HES4-202ENST00000428771 1040 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00483Q53H64 MIR4449-201ENST00000578365 66 ntBASIC14.33□□□□□ -0.12
LINC00483Q53H64 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00483Q53H64 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00483Q53H64 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 AC138932.3-201ENST00000567634 1902 ntBASIC14.32□□□□□ -0.12
LINC00483Q53H64 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00483Q53H64 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00483Q53H64 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms