Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF404Q494X3 AC142472.1-201ENST00000612013 1741 ntBASIC21.6■■□□□ 1.05
ZNF404Q494X3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF404Q494X3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
ZNF404Q494X3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF404Q494X3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF404Q494X3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ZNF404Q494X3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF404Q494X3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF404Q494X3 DUX4L11-201ENST00000611504 1267 ntBASIC21.59■■□□□ 1.05
ZNF404Q494X3 DUX4L12-201ENST00000614593 1267 ntBASIC21.59■■□□□ 1.05
ZNF404Q494X3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.59■■□□□ 1.05
ZNF404Q494X3 DUX4L14-201ENST00000621227 1267 ntBASIC21.59■■□□□ 1.05
ZNF404Q494X3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF404Q494X3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZNF404Q494X3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF404Q494X3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF404Q494X3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF404Q494X3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ZNF404Q494X3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF404Q494X3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
ZNF404Q494X3 AC135983.2-203ENST00000454486 1613 ntBASIC21.58■■□□□ 1.04
ZNF404Q494X3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF404Q494X3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.57■■□□□ 1.04
ZNF404Q494X3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZNF404Q494X3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ZNF404Q494X3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF404Q494X3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.56■■□□□ 1.04
ZNF404Q494X3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF404Q494X3 WHAMMP3-201ENST00000611636 1609 ntBASIC21.55■■□□□ 1.04
ZNF404Q494X3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF404Q494X3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF404Q494X3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF404Q494X3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF404Q494X3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF404Q494X3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.54■■□□□ 1.04
ZNF404Q494X3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF404Q494X3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF404Q494X3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF404Q494X3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF404Q494X3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF404Q494X3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.53■■□□□ 1.04
ZNF404Q494X3 WHAMMP2-203ENST00000563942 1603 ntBASIC21.53■■□□□ 1.04
ZNF404Q494X3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF404Q494X3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF404Q494X3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.52■■□□□ 1.04
ZNF404Q494X3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
ZNF404Q494X3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF404Q494X3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF404Q494X3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF404Q494X3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.52■■□□□ 1.03
ZNF404Q494X3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF404Q494X3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L13-201ENST00000554103 1267 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L15-201ENST00000611059 1267 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L23-201ENST00000615195 1269 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L24-201ENST00000617576 1269 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L22-201ENST00000618238 1269 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L20-201ENST00000619712 1269 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L21-201ENST00000622058 1269 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L10-201ENST00000622460 1267 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 DUX4L25-201ENST00000624915 1269 ntBASIC21.51■■□□□ 1.03
ZNF404Q494X3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF404Q494X3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF404Q494X3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF404Q494X3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF404Q494X3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF404Q494X3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ZNF404Q494X3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF404Q494X3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF404Q494X3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF404Q494X3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ZNF404Q494X3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF404Q494X3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF404Q494X3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF404Q494X3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF404Q494X3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.49■■□□□ 1.03
ZNF404Q494X3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF404Q494X3 AC097639.1-201ENST00000565519 1891 ntBASIC21.49■■□□□ 1.03
ZNF404Q494X3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ZNF404Q494X3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms