Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.28■■□□□ 1.16
Fam196aQ3USH1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Fam196aQ3USH1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
Fam196aQ3USH1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Fam196aQ3USH1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Fam196aQ3USH1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Fam196aQ3USH1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.26■■□□□ 1.15
Fam196aQ3USH1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
Fam196aQ3USH1 Gm10399-202ENSMUST00000202768 748 ntBASIC22.26■■□□□ 1.15
Fam196aQ3USH1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Fam196aQ3USH1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Fam196aQ3USH1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.25■■□□□ 1.15
Fam196aQ3USH1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Fam196aQ3USH1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Fam196aQ3USH1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Fam196aQ3USH1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Fam196aQ3USH1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.23■■□□□ 1.15
Fam196aQ3USH1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.23■■□□□ 1.15
Fam196aQ3USH1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Fam196aQ3USH1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Fam196aQ3USH1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam196aQ3USH1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam196aQ3USH1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Fam196aQ3USH1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam196aQ3USH1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Fam196aQ3USH1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.21■■□□□ 1.15
Fam196aQ3USH1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.21■■□□□ 1.15
Fam196aQ3USH1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.21■■□□□ 1.15
Fam196aQ3USH1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.21■■□□□ 1.15
Fam196aQ3USH1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Fam196aQ3USH1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Fam196aQ3USH1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.2■■□□□ 1.14
Fam196aQ3USH1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Fam196aQ3USH1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Fam196aQ3USH1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Fam196aQ3USH1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Fam196aQ3USH1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Fam196aQ3USH1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Fam196aQ3USH1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Fam196aQ3USH1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.18■■□□□ 1.14
Fam196aQ3USH1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Fam196aQ3USH1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.17■■□□□ 1.14
Fam196aQ3USH1 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.16■■□□□ 1.14
Fam196aQ3USH1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Fam196aQ3USH1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Fam196aQ3USH1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Fam196aQ3USH1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fam196aQ3USH1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Fam196aQ3USH1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Fam196aQ3USH1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Fam196aQ3USH1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Fam196aQ3USH1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Fam196aQ3USH1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC22.14■■□□□ 1.13
Fam196aQ3USH1 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.14■■□□□ 1.13
Fam196aQ3USH1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
Fam196aQ3USH1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Fam196aQ3USH1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Fam196aQ3USH1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Fam196aQ3USH1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.13■■□□□ 1.13
Fam196aQ3USH1 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.13■■□□□ 1.13
Fam196aQ3USH1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms