Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3U1D9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q3U1D9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.94■□□□□ 0.62
Q3U1D9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Q3U1D9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q3U1D9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Q3U1D9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3U1D9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3U1D9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Q3U1D9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Q3U1D9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Q3U1D9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q3U1D9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Q3U1D9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3U1D9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3U1D9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Q3U1D9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Q3U1D9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.91■□□□□ 0.62
Q3U1D9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.91■□□□□ 0.62
Q3U1D9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Q3U1D9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Q3U1D9 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.9■□□□□ 0.62
Q3U1D9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3U1D9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3U1D9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Q3U1D9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.89■□□□□ 0.62
Q3U1D9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3U1D9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3U1D9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3U1D9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3U1D9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3U1D9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Q3U1D9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.89■□□□□ 0.61
Q3U1D9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q3U1D9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.88■□□□□ 0.61
Q3U1D9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3U1D9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.88■□□□□ 0.61
Q3U1D9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Q3U1D9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3U1D9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Q3U1D9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3U1D9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Q3U1D9 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.87■□□□□ 0.61
Q3U1D9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3U1D9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Q3U1D9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.86■□□□□ 0.61
Q3U1D9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.86■□□□□ 0.61
Q3U1D9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.86■□□□□ 0.61
Q3U1D9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Q3U1D9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3U1D9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Q3U1D9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Q3U1D9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Q3U1D9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q3U1D9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.85■□□□□ 0.61
Q3U1D9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q3U1D9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q3U1D9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Q3U1D9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Q3U1D9 Gm45102-201ENSMUST00000207427 857 ntBASIC18.85■□□□□ 0.61
Q3U1D9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.85■□□□□ 0.61
Q3U1D9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3U1D9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3U1D9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3U1D9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3U1D9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Q3U1D9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Q3U1D9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Q3U1D9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q3U1D9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q3U1D9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Q3U1D9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Q3U1D9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.82■□□□□ 0.6
Q3U1D9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.82■□□□□ 0.6
Q3U1D9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.82■□□□□ 0.6
Q3U1D9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Q3U1D9 Gm14117-201ENSMUST00000122417 843 ntBASIC18.81■□□□□ 0.6
Q3U1D9 Gm9959-201ENSMUST00000068277 390 ntBASIC18.81■□□□□ 0.6
Q3U1D9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Q3U1D9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Q3U1D9 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.8■□□□□ 0.6
Q3U1D9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.8■□□□□ 0.6
Q3U1D9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Q3U1D9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3U1D9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Q3U1D9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms