Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 GUD1YDL238C 1470 nt9.36□□□□□ -0.91
RKR1Q04781 HDA1YNL021W 2121 nt9.36□□□□□ -0.91
RKR1Q04781 tR(ACG)DtR(ACG)D 73 nt9.36□□□□□ -0.91
RKR1Q04781 tR(ACG)EtR(ACG)E 73 nt9.36□□□□□ -0.91
RKR1Q04781 tR(ACG)KtR(ACG)K 73 nt9.36□□□□□ -0.91
RKR1Q04781 tR(ACG)LtR(ACG)L 73 nt9.36□□□□□ -0.91
RKR1Q04781 tR(ACG)OtR(ACG)O 73 nt9.36□□□□□ -0.91
RKR1Q04781 POB3YML069W 1659 nt9.35□□□□□ -0.91
RKR1Q04781 CNE1YAL058W 1509 nt9.35□□□□□ -0.91
RKR1Q04781 YGL235WYGL235W 537 nt9.35□□□□□ -0.91
RKR1Q04781 YKL031WYKL031W 414 nt9.35□□□□□ -0.91
RKR1Q04781 PMT3YOR321W 2262 nt9.35□□□□□ -0.91
RKR1Q04781 OPI8YKR035C 642 nt9.34□□□□□ -0.91
RKR1Q04781 BSC4YNL269W 396 nt9.34□□□□□ -0.91
RKR1Q04781 ATG4YNL223W 1485 nt9.34□□□□□ -0.91
RKR1Q04781 YHR070C-AYHR070C-A 411 nt9.33□□□□□ -0.92
RKR1Q04781 CCP1YKR066C 1086 nt9.33□□□□□ -0.92
RKR1Q04781 LEU5YHR002W 1074 nt9.33□□□□□ -0.92
RKR1Q04781 YMC1YPR058W 924 nt9.31□□□□□ -0.92
RKR1Q04781 MET2YNL277W 1461 nt9.31□□□□□ -0.92
RKR1Q04781 SUF5tG(CCC)O 72 nt9.3□□□□□ -0.92
RKR1Q04781 MLC1YGL106W 450 nt9.3□□□□□ -0.92
RKR1Q04781 YHC3YJL059W 1227 nt9.3□□□□□ -0.92
RKR1Q04781 MRPL13YKR006C 795 nt9.3□□□□□ -0.92
RKR1Q04781 ARR3YPR201W 1215 nt9.3□□□□□ -0.92
RKR1Q04781 MRPL36YBR122C 534 nt9.3□□□□□ -0.92
RKR1Q04781 GTT3YEL017W 1014 nt9.29□□□□□ -0.92
RKR1Q04781 APE3YBR286W 1614 nt9.27□□□□□ -0.92
RKR1Q04781 LPD1YFL018C 1500 nt9.27□□□□□ -0.93
RKR1Q04781 YCR075W-AYCR075W-A 228 nt9.26□□□□□ -0.93
RKR1Q04781 VPS61YDR136C 573 nt9.26□□□□□ -0.93
RKR1Q04781 HHY1YEL059W 309 nt9.26□□□□□ -0.93
RKR1Q04781 RPS9AYPL081W 594 nt9.26□□□□□ -0.93
RKR1Q04781 ECM27YJR106W 2178 nt9.26□□□□□ -0.93
RKR1Q04781 EFM1YHL039W 1758 nt9.26□□□□□ -0.93
RKR1Q04781 PGM1YKL127W 1713 nt9.26□□□□□ -0.93
RKR1Q04781 YHM2YMR241W 945 nt9.25□□□□□ -0.93
RKR1Q04781 YLR173WYLR173W 1827 nt9.25□□□□□ -0.93
RKR1Q04781 YCL041CYCL041C 495 nt9.24□□□□□ -0.93
RKR1Q04781 GAA1YLR088W 1845 nt9.24□□□□□ -0.93
RKR1Q04781 AMD1YML035C 2433 nt9.24□□□□□ -0.93
RKR1Q04781 GIT1YCR098C 1557 nt9.23□□□□□ -0.93
RKR1Q04781 PAN6YIL145C 930 nt9.23□□□□□ -0.93
RKR1Q04781 SOG2YOR353C 2376 nt9.22□□□□□ -0.93
RKR1Q04781 SEC20YDR498C 1152 nt9.22□□□□□ -0.93
RKR1Q04781 YEL053W-AYEL053W-A 348 nt9.22□□□□□ -0.93
RKR1Q04781 NUD1YOR373W 2556 nt9.22□□□□□ -0.93
RKR1Q04781 ORC5YNL261W 1440 nt9.21□□□□□ -0.94
RKR1Q04781 DJP1YIR004W 1299 nt9.2□□□□□ -0.94
RKR1Q04781 YDR109CYDR109C 2148 nt9.19□□□□□ -0.94
RKR1Q04781 YBR230W-AYBR230W-A 201 nt9.19□□□□□ -0.94
RKR1Q04781 KKQ8YKL168C 2175 nt9.18□□□□□ -0.94
RKR1Q04781 YBR144CYBR144C 315 nt9.18□□□□□ -0.94
RKR1Q04781 YMR010WYMR010W 1218 nt9.17□□□□□ -0.94
RKR1Q04781 YPL062WYPL062W 405 nt9.17□□□□□ -0.94
RKR1Q04781 RTG2YGL252C 1767 nt9.17□□□□□ -0.94
RKR1Q04781 PRM10YJL108C 1152 nt9.16□□□□□ -0.94
RKR1Q04781 COX5AYNL052W 462 nt9.16□□□□□ -0.94
RKR1Q04781 GAT3YLR013W 426 nt9.16□□□□□ -0.94
RKR1Q04781 KIN1YDR122W 3195 nt9.15□□□□□ -0.94
RKR1Q04781 BDF2YDL070W 1917 nt9.15□□□□□ -0.94
RKR1Q04781 SES1YDR023W 1389 nt9.15□□□□□ -0.94
RKR1Q04781 SRF1YDL133W 1314 nt9.15□□□□□ -0.95
RKR1Q04781 ALR1YOL130W 2580 nt9.14□□□□□ -0.95
RKR1Q04781 COX9YDL067C 180 nt9.13□□□□□ -0.95
RKR1Q04781 YNL190WYNL190W 615 nt9.13□□□□□ -0.95
RKR1Q04781 SHM1YBR263W 1473 nt9.12□□□□□ -0.95
RKR1Q04781 YGR182CYGR182C 354 nt9.12□□□□□ -0.95
RKR1Q04781 BCY1YIL033C 1251 nt9.12□□□□□ -0.95
RKR1Q04781 DPH5YLR172C 903 nt9.12□□□□□ -0.95
RKR1Q04781 COA1YIL157C 594 nt9.12□□□□□ -0.95
RKR1Q04781 ATG33YLR356W 594 nt9.12□□□□□ -0.95
RKR1Q04781 APS3YJL024C 585 nt9.11□□□□□ -0.95
RKR1Q04781 PYC2YBR218C 3543 nt9.1□□□□□ -0.95
RKR1Q04781 XBP1YIL101C 1944 nt9.1□□□□□ -0.95
RKR1Q04781 CRP1YHR146W 1398 nt9.09□□□□□ -0.95
RKR1Q04781 LAS17YOR181W 1902 nt9.09□□□□□ -0.95
RKR1Q04781 QNS1YHR074W 2145 nt9.09□□□□□ -0.95
RKR1Q04781 ATO3YDR384C 828 nt9.08□□□□□ -0.96
RKR1Q04781 CWC21YDR482C 408 nt9.08□□□□□ -0.96
RKR1Q04781 ICT1YLR099C 1185 nt9.08□□□□□ -0.96
RKR1Q04781 TEP1YNL128W 1305 nt9.08□□□□□ -0.96
RKR1Q04781 SEC23YPR181C 2307 nt9.08□□□□□ -0.96
RKR1Q04781 GYP8YFL027C 1494 nt9.08□□□□□ -0.96
RKR1Q04781 COT1YOR316C 1320 nt9.08□□□□□ -0.96
RKR1Q04781 YDR154CYDR154C 351 nt9.07□□□□□ -0.96
RKR1Q04781 YGL194C-AYGL194C-A 243 nt9.07□□□□□ -0.96
RKR1Q04781 CSG2YBR036C 1233 nt9.07□□□□□ -0.96
RKR1Q04781 YCL065WYCL065W 369 nt9.07□□□□□ -0.96
RKR1Q04781 YDR278CYDR278C 318 nt9.07□□□□□ -0.96
RKR1Q04781 YBR124WYBR124W 360 nt9.07□□□□□ -0.96
RKR1Q04781 YCR097W-AYCR097W-A 267 nt9.06□□□□□ -0.96
RKR1Q04781 ATP14YLR295C 375 nt9.06□□□□□ -0.96
RKR1Q04781 VRP1YLR337C 2454 nt9.06□□□□□ -0.96
RKR1Q04781 MTC1YJL123C 1437 nt9.05□□□□□ -0.96
RKR1Q04781 YGR068W-AYGR068W-A 96 nt9.05□□□□□ -0.96
RKR1Q04781 HSX1tR(CCU)J 72 nt9.05□□□□□ -0.96
RKR1Q04781 GLN1YPR035W 1113 nt9.05□□□□□ -0.96
RKR1Q04781 YDL034WYDL034W 345 nt9.04□□□□□ -0.96
RKR1Q04781 UTR4YEL038W 684 nt9.04□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 71 ms