Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Six5P70178 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Six5P70178 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Six5P70178 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Six5P70178 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Six5P70178 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Six5P70178 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.33■□□□□ 0.84
Six5P70178 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Six5P70178 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Six5P70178 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six5P70178 Cap2-205ENSMUST00000225824 1634 ntBASIC20.32■□□□□ 0.84
Six5P70178 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.32■□□□□ 0.84
Six5P70178 Gm10420-201ENSMUST00000121713 882 ntBASIC20.32■□□□□ 0.84
Six5P70178 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.32■□□□□ 0.84
Six5P70178 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Six5P70178 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Six5P70178 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Six5P70178 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Six5P70178 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Six5P70178 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Six5P70178 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.3■□□□□ 0.84
Six5P70178 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six5P70178 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six5P70178 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Six5P70178 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Six5P70178 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six5P70178 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six5P70178 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.28■□□□□ 0.84
Six5P70178 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Six5P70178 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six5P70178 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Six5P70178 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Six5P70178 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.27■□□□□ 0.84
Six5P70178 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six5P70178 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six5P70178 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Six5P70178 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Six5P70178 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
Six5P70178 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six5P70178 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six5P70178 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six5P70178 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Six5P70178 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Six5P70178 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.25■□□□□ 0.83
Six5P70178 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.25■□□□□ 0.83
Six5P70178 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six5P70178 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Six5P70178 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Six5P70178 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Six5P70178 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Six5P70178 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Six5P70178 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Six5P70178 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Six5P70178 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Six5P70178 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.22■□□□□ 0.83
Six5P70178 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Six5P70178 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Six5P70178 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Six5P70178 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.21■□□□□ 0.83
Six5P70178 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.21■□□□□ 0.83
Six5P70178 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.21■□□□□ 0.83
Six5P70178 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Six5P70178 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Six5P70178 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Six5P70178 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Six5P70178 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six5P70178 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Six5P70178 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six5P70178 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.19■□□□□ 0.82
Six5P70178 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six5P70178 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six5P70178 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six5P70178 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Six5P70178 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.19■□□□□ 0.82
Six5P70178 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Six5P70178 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Six5P70178 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six5P70178 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six5P70178 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms