Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ybx1P62960 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ybx1P62960 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ybx1P62960 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ybx1P62960 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Ybx1P62960 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ybx1P62960 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
Ybx1P62960 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ybx1P62960 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ybx1P62960 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Ybx1P62960 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.5■■□□□ 1.19
Ybx1P62960 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.5■■□□□ 1.19
Ybx1P62960 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ybx1P62960 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.5■■□□□ 1.19
Ybx1P62960 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ybx1P62960 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ybx1P62960 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ybx1P62960 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ybx1P62960 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Ybx1P62960 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Ybx1P62960 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.48■■□□□ 1.19
Ybx1P62960 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.48■■□□□ 1.19
Ybx1P62960 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ybx1P62960 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ybx1P62960 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.47■■□□□ 1.19
Ybx1P62960 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ybx1P62960 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.47■■□□□ 1.19
Ybx1P62960 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.47■■□□□ 1.19
Ybx1P62960 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.47■■□□□ 1.19
Ybx1P62960 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ybx1P62960 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ybx1P62960 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ybx1P62960 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ybx1P62960 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ybx1P62960 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.46■■□□□ 1.19
Ybx1P62960 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.46■■□□□ 1.19
Ybx1P62960 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Ybx1P62960 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ybx1P62960 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.19
Ybx1P62960 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.45■■□□□ 1.18
Ybx1P62960 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.45■■□□□ 1.18
Ybx1P62960 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ybx1P62960 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Ybx1P62960 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ybx1P62960 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ybx1P62960 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ybx1P62960 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ybx1P62960 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Ybx1P62960 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ybx1P62960 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Ybx1P62960 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ybx1P62960 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.43■■□□□ 1.18
Ybx1P62960 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.43■■□□□ 1.18
Ybx1P62960 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.43■■□□□ 1.18
Ybx1P62960 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.43■■□□□ 1.18
Ybx1P62960 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.43■■□□□ 1.18
Ybx1P62960 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ybx1P62960 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.42■■□□□ 1.18
Ybx1P62960 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.42■■□□□ 1.18
Ybx1P62960 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ybx1P62960 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Ybx1P62960 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ybx1P62960 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ybx1P62960 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ybx1P62960 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Ybx1P62960 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ybx1P62960 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ybx1P62960 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ybx1P62960 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.4■■□□□ 1.18
Ybx1P62960 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ybx1P62960 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ybx1P62960 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ybx1P62960 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ybx1P62960 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ybx1P62960 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ybx1P62960 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ybx1P62960 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ybx1P62960 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ybx1P62960 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.37■■□□□ 1.17
Ybx1P62960 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.37■■□□□ 1.17
Ybx1P62960 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.37■■□□□ 1.17
Ybx1P62960 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ybx1P62960 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ybx1P62960 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ybx1P62960 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ybx1P62960 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ybx1P62960 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.36■■□□□ 1.17
Ybx1P62960 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ybx1P62960 Gm7417-201ENSMUST00000192950 473 ntBASIC22.36■■□□□ 1.17
Ybx1P62960 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ybx1P62960 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ybx1P62960 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ybx1P62960 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.35■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms