Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sec61a1P61620 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sec61a1P61620 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sec61a1P61620 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sec61a1P61620 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sec61a1P61620 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sec61a1P61620 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sec61a1P61620 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sec61a1P61620 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sec61a1P61620 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.98■□□□□ 0.63
Sec61a1P61620 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sec61a1P61620 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sec61a1P61620 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sec61a1P61620 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sec61a1P61620 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.97■□□□□ 0.63
Sec61a1P61620 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sec61a1P61620 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a1P61620 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a1P61620 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a1P61620 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a1P61620 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sec61a1P61620 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a1P61620 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a1P61620 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a1P61620 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a1P61620 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.95■□□□□ 0.62
Sec61a1P61620 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a1P61620 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sec61a1P61620 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.95■□□□□ 0.62
Sec61a1P61620 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sec61a1P61620 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a1P61620 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sec61a1P61620 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Sec61a1P61620 Cap2-205ENSMUST00000225824 1634 ntBASIC18.94■□□□□ 0.62
Sec61a1P61620 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a1P61620 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.94■□□□□ 0.62
Sec61a1P61620 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sec61a1P61620 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.93■□□□□ 0.62
Sec61a1P61620 Gm9812-201ENSMUST00000061934 968 ntBASIC18.93■□□□□ 0.62
Sec61a1P61620 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sec61a1P61620 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sec61a1P61620 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a1P61620 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sec61a1P61620 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Sec61a1P61620 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sec61a1P61620 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a1P61620 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.92■□□□□ 0.62
Sec61a1P61620 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a1P61620 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sec61a1P61620 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.92■□□□□ 0.62
Sec61a1P61620 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sec61a1P61620 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a1P61620 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.9■□□□□ 0.62
Sec61a1P61620 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a1P61620 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sec61a1P61620 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sec61a1P61620 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sec61a1P61620 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sec61a1P61620 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.89■□□□□ 0.62
Sec61a1P61620 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a1P61620 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.89■□□□□ 0.61
Sec61a1P61620 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.89■□□□□ 0.61
Sec61a1P61620 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a1P61620 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a1P61620 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a1P61620 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sec61a1P61620 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.88■□□□□ 0.61
Sec61a1P61620 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sec61a1P61620 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sec61a1P61620 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a1P61620 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a1P61620 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.88■□□□□ 0.61
Sec61a1P61620 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sec61a1P61620 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a1P61620 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a1P61620 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a1P61620 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sec61a1P61620 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sec61a1P61620 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a1P61620 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a1P61620 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sec61a1P61620 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms