Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBE2NP61088 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE2NP61088 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBE2NP61088 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
UBE2NP61088 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2NP61088 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.07■□□□□ 0.96
UBE2NP61088 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2NP61088 KRT18P10-201ENST00000388836 1287 ntBASIC21.07■□□□□ 0.96
UBE2NP61088 SPCS2P3-201ENST00000500401 656 ntBASIC21.07■□□□□ 0.96
UBE2NP61088 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2NP61088 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE2NP61088 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.07■□□□□ 0.96
UBE2NP61088 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBE2NP61088 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.06■□□□□ 0.96
UBE2NP61088 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2NP61088 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2NP61088 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBE2NP61088 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.05■□□□□ 0.96
UBE2NP61088 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.05■□□□□ 0.96
UBE2NP61088 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2NP61088 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2NP61088 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBE2NP61088 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.05■□□□□ 0.96
UBE2NP61088 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
UBE2NP61088 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
UBE2NP61088 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBE2NP61088 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2NP61088 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2NP61088 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
UBE2NP61088 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBE2NP61088 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.03■□□□□ 0.96
UBE2NP61088 AC139795.1-202ENST00000500444 432 ntBASIC21.03■□□□□ 0.96
UBE2NP61088 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.03■□□□□ 0.96
UBE2NP61088 BHLHE23-202ENST00000612929 1109 ntBASIC21.03■□□□□ 0.96
UBE2NP61088 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.02■□□□□ 0.96
UBE2NP61088 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.02■□□□□ 0.96
UBE2NP61088 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBE2NP61088 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2NP61088 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2NP61088 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.01■□□□□ 0.95
UBE2NP61088 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
UBE2NP61088 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UBE2NP61088 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UBE2NP61088 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBE2NP61088 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2NP61088 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21■□□□□ 0.95
UBE2NP61088 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
UBE2NP61088 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
UBE2NP61088 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBE2NP61088 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2NP61088 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
UBE2NP61088 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
UBE2NP61088 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
UBE2NP61088 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2NP61088 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBE2NP61088 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.99■□□□□ 0.95
UBE2NP61088 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.99■□□□□ 0.95
UBE2NP61088 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2NP61088 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2NP61088 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
UBE2NP61088 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2NP61088 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2NP61088 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2NP61088 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE2NP61088 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE2NP61088 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.98■□□□□ 0.95
UBE2NP61088 AC092803.2-201ENST00000564287 1899 ntBASIC20.98■□□□□ 0.95
UBE2NP61088 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.98■□□□□ 0.95
UBE2NP61088 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBE2NP61088 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.97■□□□□ 0.95
UBE2NP61088 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBE2NP61088 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
UBE2NP61088 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE2NP61088 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE2NP61088 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.97■□□□□ 0.95
UBE2NP61088 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBE2NP61088 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2NP61088 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBE2NP61088 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms