Protein–RNA interactions for Protein: P51675

Ccr1, C-C chemokine receptor type 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1P51675 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ccr1P51675 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ccr1P51675 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccr1P51675 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.9■■□□□ 1.42
Ccr1P51675 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccr1P51675 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Ccr1P51675 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccr1P51675 Rps24-207ENSMUST00000224568 714 ntBASIC23.89■■□□□ 1.41
Ccr1P51675 Gm10232-201ENSMUST00000089221 720 ntBASIC23.89■■□□□ 1.41
Ccr1P51675 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccr1P51675 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccr1P51675 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccr1P51675 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccr1P51675 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ccr1P51675 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.88■■□□□ 1.41
Ccr1P51675 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccr1P51675 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccr1P51675 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccr1P51675 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.87■■□□□ 1.41
Ccr1P51675 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccr1P51675 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccr1P51675 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccr1P51675 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Ccr1P51675 Gm45102-201ENSMUST00000207427 857 ntBASIC23.85■■□□□ 1.41
Ccr1P51675 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccr1P51675 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ccr1P51675 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.84■■□□□ 1.41
Ccr1P51675 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.84■■□□□ 1.41
Ccr1P51675 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccr1P51675 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccr1P51675 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Ccr1P51675 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccr1P51675 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
Ccr1P51675 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccr1P51675 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccr1P51675 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccr1P51675 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ccr1P51675 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.82■■□□□ 1.4
Ccr1P51675 Gm9959-201ENSMUST00000068277 390 ntBASIC23.82■■□□□ 1.4
Ccr1P51675 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Ccr1P51675 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccr1P51675 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccr1P51675 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccr1P51675 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccr1P51675 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.81■■□□□ 1.4
Ccr1P51675 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.81■■□□□ 1.4
Ccr1P51675 Gm14117-201ENSMUST00000122417 843 ntBASIC23.8■■□□□ 1.4
Ccr1P51675 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccr1P51675 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccr1P51675 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccr1P51675 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccr1P51675 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.79■■□□□ 1.4
Ccr1P51675 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccr1P51675 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.79■■□□□ 1.4
Ccr1P51675 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccr1P51675 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccr1P51675 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccr1P51675 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccr1P51675 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.78■■□□□ 1.4
Ccr1P51675 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccr1P51675 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccr1P51675 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.78■■□□□ 1.4
Ccr1P51675 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccr1P51675 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccr1P51675 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccr1P51675 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccr1P51675 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccr1P51675 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccr1P51675 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.77■■□□□ 1.4
Ccr1P51675 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ccr1P51675 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccr1P51675 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccr1P51675 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Ccr1P51675 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccr1P51675 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccr1P51675 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccr1P51675 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ccr1P51675 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccr1P51675 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccr1P51675 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccr1P51675 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Ccr1P51675 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Ccr1P51675 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.74■■□□□ 1.39
Ccr1P51675 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.73■■□□□ 1.39
Ccr1P51675 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ccr1P51675 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccr1P51675 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccr1P51675 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccr1P51675 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccr1P51675 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccr1P51675 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccr1P51675 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccr1P51675 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccr1P51675 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccr1P51675 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccr1P51675 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccr1P51675 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccr1P51675 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccr1P51675 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccr1P51675 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms