Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.62■□□□□ 0.89
Nkx2-6P43688 Gm9959-201ENSMUST00000068277 390 ntBASIC20.62■□□□□ 0.89
Nkx2-6P43688 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-6P43688 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Gm14117-201ENSMUST00000122417 843 ntBASIC20.61■□□□□ 0.89
Nkx2-6P43688 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkx2-6P43688 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-6P43688 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nkx2-6P43688 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-6P43688 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nkx2-6P43688 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.6■□□□□ 0.89
Nkx2-6P43688 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkx2-6P43688 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nkx2-6P43688 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-6P43688 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-6P43688 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-6P43688 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-6P43688 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-6P43688 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-6P43688 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Nkx2-6P43688 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-6P43688 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-6P43688 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkx2-6P43688 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-6P43688 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.57■□□□□ 0.88
Nkx2-6P43688 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nkx2-6P43688 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-6P43688 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-6P43688 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.56■□□□□ 0.88
Nkx2-6P43688 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Nkx2-6P43688 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-6P43688 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-6P43688 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-6P43688 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-6P43688 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-6P43688 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nkx2-6P43688 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-6P43688 Gm15039-201ENSMUST00000118914 875 ntBASIC20.54■□□□□ 0.88
Nkx2-6P43688 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nkx2-6P43688 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nkx2-6P43688 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-6P43688 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.53■□□□□ 0.88
Nkx2-6P43688 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-6P43688 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-6P43688 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-6P43688 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-6P43688 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.53■□□□□ 0.88
Nkx2-6P43688 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-6P43688 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx2-6P43688 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx2-6P43688 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.52■□□□□ 0.88
Nkx2-6P43688 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.52■□□□□ 0.88
Nkx2-6P43688 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-6P43688 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-6P43688 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-6P43688 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-6P43688 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nkx2-6P43688 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-6P43688 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nkx2-6P43688 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.49■□□□□ 0.87
Nkx2-6P43688 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-6P43688 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-6P43688 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-6P43688 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.48■□□□□ 0.87
Nkx2-6P43688 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-6P43688 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.48■□□□□ 0.87
Nkx2-6P43688 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-6P43688 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-6P43688 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-6P43688 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Nkx2-6P43688 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-6P43688 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.47■□□□□ 0.87
Nkx2-6P43688 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-6P43688 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-6P43688 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-6P43688 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-6P43688 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nkx2-6P43688 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms