Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Fen1P39749 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Fen1P39749 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Fen1P39749 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Fen1P39749 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Fen1P39749 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fen1P39749 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fen1P39749 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fen1P39749 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.72■■□□□ 1.07
Fen1P39749 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Fen1P39749 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Fen1P39749 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Fen1P39749 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Fen1P39749 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Fen1P39749 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Fen1P39749 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Fen1P39749 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Fen1P39749 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Fen1P39749 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Fen1P39749 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fen1P39749 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fen1P39749 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fen1P39749 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fen1P39749 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Fen1P39749 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Fen1P39749 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.67■■□□□ 1.06
Fen1P39749 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.67■■□□□ 1.06
Fen1P39749 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.67■■□□□ 1.06
Fen1P39749 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Fen1P39749 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Fen1P39749 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Fen1P39749 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Fen1P39749 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Fen1P39749 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.66■■□□□ 1.06
Fen1P39749 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Fen1P39749 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Fen1P39749 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.66■■□□□ 1.06
Fen1P39749 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Fen1P39749 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.65■■□□□ 1.06
Fen1P39749 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fen1P39749 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fen1P39749 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Fen1P39749 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Fen1P39749 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Fen1P39749 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.64■■□□□ 1.05
Fen1P39749 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Fen1P39749 Gm4799-201ENSMUST00000095396 657 ntBASIC21.63■■□□□ 1.05
Fen1P39749 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Fen1P39749 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fen1P39749 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fen1P39749 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Fen1P39749 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Fen1P39749 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.62■■□□□ 1.05
Fen1P39749 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fen1P39749 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.61■■□□□ 1.05
Fen1P39749 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fen1P39749 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Fen1P39749 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Fen1P39749 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.6■■□□□ 1.05
Fen1P39749 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fen1P39749 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Fen1P39749 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fen1P39749 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Fen1P39749 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Fen1P39749 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Fen1P39749 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Fen1P39749 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Fen1P39749 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Fen1P39749 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Fen1P39749 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.59■■□□□ 1.05
Fen1P39749 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Fen1P39749 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.59■■□□□ 1.05
Fen1P39749 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.59■■□□□ 1.05
Fen1P39749 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fen1P39749 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fen1P39749 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.58■■□□□ 1.05
Fen1P39749 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.58■■□□□ 1.05
Fen1P39749 Gm7432-201ENSMUST00000210343 879 ntBASIC21.58■■□□□ 1.05
Fen1P39749 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Fen1P39749 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Fen1P39749 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Fen1P39749 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Fen1P39749 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Fen1P39749 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Fen1P39749 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Fen1P39749 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Fen1P39749 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms