Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.99■□□□□ 0.47
Cdkn1aP39689 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkn1aP39689 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkn1aP39689 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkn1aP39689 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkn1aP39689 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdkn1aP39689 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkn1aP39689 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.98■□□□□ 0.47
Cdkn1aP39689 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkn1aP39689 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.98■□□□□ 0.47
Cdkn1aP39689 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkn1aP39689 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.98■□□□□ 0.47
Cdkn1aP39689 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.98■□□□□ 0.47
Cdkn1aP39689 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkn1aP39689 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdkn1aP39689 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn1aP39689 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.97■□□□□ 0.47
Cdkn1aP39689 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.97■□□□□ 0.47
Cdkn1aP39689 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn1aP39689 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdkn1aP39689 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdkn1aP39689 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdkn1aP39689 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn1aP39689 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn1aP39689 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn1aP39689 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdkn1aP39689 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.94■□□□□ 0.46
Cdkn1aP39689 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn1aP39689 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdkn1aP39689 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn1aP39689 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdkn1aP39689 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cdkn1aP39689 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdkn1aP39689 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.92■□□□□ 0.46
Cdkn1aP39689 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdkn1aP39689 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn1aP39689 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.92■□□□□ 0.46
Cdkn1aP39689 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.92■□□□□ 0.46
Cdkn1aP39689 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdkn1aP39689 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Cdkn1aP39689 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cdkn1aP39689 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdkn1aP39689 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cdkn1aP39689 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdkn1aP39689 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkn1aP39689 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdkn1aP39689 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkn1aP39689 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkn1aP39689 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdkn1aP39689 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cdkn1aP39689 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdkn1aP39689 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.87■□□□□ 0.45
Cdkn1aP39689 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.87■□□□□ 0.45
Cdkn1aP39689 Gm10232-201ENSMUST00000089221 720 ntBASIC17.87■□□□□ 0.45
Cdkn1aP39689 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cdkn1aP39689 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdkn1aP39689 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdkn1aP39689 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms