Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh4P39038 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cdh4P39038 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh4P39038 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Cdh4P39038 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.76■□□□□ 0.91
Cdh4P39038 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh4P39038 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh4P39038 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh4P39038 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh4P39038 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh4P39038 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.75■□□□□ 0.91
Cdh4P39038 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh4P39038 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.74■□□□□ 0.91
Cdh4P39038 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh4P39038 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh4P39038 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh4P39038 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdh4P39038 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh4P39038 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdh4P39038 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdh4P39038 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh4P39038 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh4P39038 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh4P39038 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.73■□□□□ 0.91
Cdh4P39038 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdh4P39038 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cdh4P39038 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh4P39038 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.71■□□□□ 0.91
Cdh4P39038 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cdh4P39038 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh4P39038 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh4P39038 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.7■□□□□ 0.9
Cdh4P39038 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh4P39038 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cdh4P39038 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh4P39038 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh4P39038 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh4P39038 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh4P39038 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdh4P39038 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh4P39038 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh4P39038 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdh4P39038 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh4P39038 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdh4P39038 Gm5921-201ENSMUST00000075898 882 ntBASIC20.68■□□□□ 0.9
Cdh4P39038 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh4P39038 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdh4P39038 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cdh4P39038 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh4P39038 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh4P39038 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh4P39038 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh4P39038 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh4P39038 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Cdh4P39038 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh4P39038 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh4P39038 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdh4P39038 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.66■□□□□ 0.9
Cdh4P39038 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh4P39038 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh4P39038 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh4P39038 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh4P39038 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Cdh4P39038 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh4P39038 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdh4P39038 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh4P39038 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh4P39038 Gm22567-201ENSMUST00000175542 342 ntBASIC20.64■□□□□ 0.89
Cdh4P39038 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cdh4P39038 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cdh4P39038 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Cdh4P39038 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdh4P39038 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdh4P39038 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdh4P39038 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh4P39038 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.63■□□□□ 0.89
Cdh4P39038 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdh4P39038 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh4P39038 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdh4P39038 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh4P39038 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdh4P39038 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms