Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
GDF1P27539 RPS2P7-201ENST00000447334 885 ntBASIC21.85■■□□□ 1.09
GDF1P27539 KRT8P33-201ENST00000508125 1423 ntBASIC21.85■■□□□ 1.09
GDF1P27539 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.84■■□□□ 1.09
GDF1P27539 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.84■■□□□ 1.09
GDF1P27539 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GDF1P27539 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.83■■□□□ 1.09
GDF1P27539 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
GDF1P27539 AC087393.1-201ENST00000582896 145 ntBASIC21.83■■□□□ 1.09
GDF1P27539 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
GDF1P27539 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.83■■□□□ 1.08
GDF1P27539 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
GDF1P27539 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDF1P27539 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GDF1P27539 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.82■■□□□ 1.08
GDF1P27539 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.82■■□□□ 1.08
GDF1P27539 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.82■■□□□ 1.08
GDF1P27539 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GDF1P27539 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
GDF1P27539 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
GDF1P27539 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.81■■□□□ 1.08
GDF1P27539 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GDF1P27539 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDF1P27539 AL121749.1-202ENST00000609313 2153 ntBASIC21.8■■□□□ 1.08
GDF1P27539 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDF1P27539 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.8■■□□□ 1.08
GDF1P27539 YBX1P4-201ENST00000392794 808 ntBASIC21.8■■□□□ 1.08
GDF1P27539 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GDF1P27539 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.79■■□□□ 1.08
GDF1P27539 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.79■■□□□ 1.08
GDF1P27539 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.79■■□□□ 1.08
GDF1P27539 PVT1_1.1-201ENST00000615125 194 ntBASIC21.79■■□□□ 1.08
GDF1P27539 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.79■■□□□ 1.08
GDF1P27539 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GDF1P27539 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
GDF1P27539 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.78■■□□□ 1.08
GDF1P27539 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
GDF1P27539 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.77■■□□□ 1.08
GDF1P27539 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GDF1P27539 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
GDF1P27539 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.77■■□□□ 1.08
GDF1P27539 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.08
GDF1P27539 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.77■■□□□ 1.08
GDF1P27539 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
GDF1P27539 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GDF1P27539 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GDF1P27539 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.76■■□□□ 1.07
GDF1P27539 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GDF1P27539 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GDF1P27539 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GDF1P27539 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.75■■□□□ 1.07
GDF1P27539 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF1P27539 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GDF1P27539 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.75■■□□□ 1.07
GDF1P27539 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDF1P27539 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.74■■□□□ 1.07
GDF1P27539 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GDF1P27539 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GDF1P27539 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GDF1P27539 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
GDF1P27539 LONRF2P2-201ENST00000439212 571 ntBASIC21.73■■□□□ 1.07
GDF1P27539 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.73■■□□□ 1.07
GDF1P27539 AC019171.1-201ENST00000601251 1056 ntBASIC21.73■■□□□ 1.07
GDF1P27539 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.73■■□□□ 1.07
GDF1P27539 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GDF1P27539 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.72■■□□□ 1.07
GDF1P27539 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GDF1P27539 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF1P27539 AC103834.1-201ENST00000520383 144 ntBASIC21.72■■□□□ 1.07
GDF1P27539 MIR4508-201ENST00000584178 70 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms