Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hoxb9P20615 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb9P20615 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.97■□□□□ 0.95
Hoxb9P20615 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb9P20615 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.97■□□□□ 0.95
Hoxb9P20615 Gm12366-201ENSMUST00000121722 873 ntBASIC20.97■□□□□ 0.95
Hoxb9P20615 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.97■□□□□ 0.95
Hoxb9P20615 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb9P20615 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb9P20615 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.97■□□□□ 0.95
Hoxb9P20615 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.97■□□□□ 0.95
Hoxb9P20615 Gm5786-201ENSMUST00000085368 882 ntBASIC20.97■□□□□ 0.95
Hoxb9P20615 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb9P20615 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb9P20615 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxb9P20615 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Hoxb9P20615 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.96■□□□□ 0.95
Hoxb9P20615 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Hoxb9P20615 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxb9P20615 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.95■□□□□ 0.94
Hoxb9P20615 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.95■□□□□ 0.94
Hoxb9P20615 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.95■□□□□ 0.94
Hoxb9P20615 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxb9P20615 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
Hoxb9P20615 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb9P20615 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb9P20615 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb9P20615 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Hoxb9P20615 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb9P20615 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.93■□□□□ 0.94
Hoxb9P20615 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.93■□□□□ 0.94
Hoxb9P20615 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb9P20615 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Hoxb9P20615 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxb9P20615 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb9P20615 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb9P20615 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb9P20615 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hoxb9P20615 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb9P20615 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hoxb9P20615 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hoxb9P20615 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.9■□□□□ 0.94
Hoxb9P20615 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hoxb9P20615 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb9P20615 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxb9P20615 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxb9P20615 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Hoxb9P20615 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Hoxb9P20615 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb9P20615 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb9P20615 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb9P20615 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb9P20615 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.88■□□□□ 0.93
Hoxb9P20615 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb9P20615 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hoxb9P20615 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb9P20615 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb9P20615 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hoxb9P20615 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Hoxb9P20615 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.87■□□□□ 0.93
Hoxb9P20615 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxb9P20615 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb9P20615 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb9P20615 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb9P20615 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.86■□□□□ 0.93
Hoxb9P20615 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Hoxb9P20615 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb9P20615 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb9P20615 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb9P20615 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxb9P20615 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxb9P20615 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb9P20615 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms