Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.68■■□□□ 1.7
Polr2aP08775 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Polr2aP08775 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Polr2aP08775 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.68■■□□□ 1.7
Polr2aP08775 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Polr2aP08775 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Polr2aP08775 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Polr2aP08775 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Polr2aP08775 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Polr2aP08775 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Polr2aP08775 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.67■■□□□ 1.7
Polr2aP08775 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC25.67■■□□□ 1.7
Polr2aP08775 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Polr2aP08775 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Polr2aP08775 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Polr2aP08775 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Polr2aP08775 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Polr2aP08775 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Polr2aP08775 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.64■■□□□ 1.7
Polr2aP08775 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.64■■□□□ 1.7
Polr2aP08775 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.64■■□□□ 1.69
Polr2aP08775 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Polr2aP08775 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.64■■□□□ 1.69
Polr2aP08775 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Polr2aP08775 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Polr2aP08775 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.63■■□□□ 1.69
Polr2aP08775 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Polr2aP08775 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Polr2aP08775 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Polr2aP08775 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Polr2aP08775 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Polr2aP08775 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.62■■□□□ 1.69
Polr2aP08775 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Polr2aP08775 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Polr2aP08775 Gm10399-202ENSMUST00000202768 748 ntBASIC25.62■■□□□ 1.69
Polr2aP08775 AC140930.3-201ENSMUST00000222935 274 ntBASIC25.61■■□□□ 1.69
Polr2aP08775 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC25.6■■□□□ 1.69
Polr2aP08775 Gm40881-201ENSMUST00000223397 166 ntBASIC25.6■■□□□ 1.69
Polr2aP08775 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Polr2aP08775 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Polr2aP08775 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Polr2aP08775 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Polr2aP08775 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Polr2aP08775 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Polr2aP08775 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Polr2aP08775 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Polr2aP08775 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Polr2aP08775 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Polr2aP08775 Gm12821-201ENSMUST00000120022 600 ntBASIC25.57■■□□□ 1.68
Polr2aP08775 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Polr2aP08775 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC25.56■■□□□ 1.68
Polr2aP08775 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Polr2aP08775 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Polr2aP08775 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Polr2aP08775 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Polr2aP08775 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2aP08775 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2aP08775 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2aP08775 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2aP08775 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2aP08775 Slc35b2-207ENSMUST00000226086 850 ntBASIC25.53■■□□□ 1.68
Polr2aP08775 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Polr2aP08775 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.52■■□□□ 1.68
Polr2aP08775 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.52■■□□□ 1.68
Polr2aP08775 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.52■■□□□ 1.68
Polr2aP08775 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Polr2aP08775 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
Polr2aP08775 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Polr2aP08775 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Polr2aP08775 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Polr2aP08775 AC153524.1-201ENSMUST00000220436 1935 ntBASIC25.51■■□□□ 1.67
Polr2aP08775 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.51■■□□□ 1.67
Polr2aP08775 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Polr2aP08775 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Polr2aP08775 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Polr2aP08775 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Polr2aP08775 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Polr2aP08775 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Polr2aP08775 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Polr2aP08775 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Polr2aP08775 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC25.49■■□□□ 1.67
Polr2aP08775 Nsd1-206ENSMUST00000224918 1001 ntBASIC25.49■■□□□ 1.67
Polr2aP08775 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Polr2aP08775 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Polr2aP08775 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Polr2aP08775 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Polr2aP08775 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Polr2aP08775 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Polr2aP08775 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Polr2aP08775 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Polr2aP08775 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC25.46■■□□□ 1.67
Polr2aP08775 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Polr2aP08775 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.46■■□□□ 1.67
Polr2aP08775 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Polr2aP08775 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Polr2aP08775 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.45■■□□□ 1.67
Polr2aP08775 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Polr2aP08775 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Polr2aP08775 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Polr2aP08775 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms